Sphingomonas sp. NIC1: A7E77_08985
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Entry
A7E77_08985 CDS
T04479
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
snj
Sphingomonas sp. NIC1
Pathway
snj01501
beta-Lactam resistance
snj02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snj00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A7E77_08985
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A7E77_08985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snj02000
]
A7E77_08985
01504 Antimicrobial resistance genes [BR:
snj01504
]
A7E77_08985
Transporters [BR:
snj02000
]
Other transporters
Pores ion channels [TC:
1
]
A7E77_08985
Antimicrobial resistance genes [BR:
snj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
A7E77_08985
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
A7E77_08985
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
A7E77_08985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
YqeC
Motif
Other DBs
NCBI-ProteinID:
ANC87015
LinkDB
All DBs
Position
complement(1867647..1869062)
Genome browser
AA seq
471 aa
AA seq
DB search
MTPYIFKPKPALLLALLASACAVPHSPPAVAPVAPASLGLAADASPAIADDWWTAFGDPQ
LDRLVADATKENPNLDAALARVAQAQAMLAARDAERGPDVTFDGSAQVSRLSGRYTIPPP
YAGSVRFLGSAQANLNWNLDLFGRQKAAIEGARASARAAALDVAAARLAIAGSVVQTYID
LARAEAQATLARRTIATRERSVQLVDVRIRNRLASNLQATAAQTLLSQARVALAEADGAR
ARAVNALAALAGRGPDYAAAIRPATLRLDTALPLPARVPADLIARRPDIAAALARIEAAA
AGRQVARRAFYPNINLAAFAGFQAVGLGNLFSLDAGTAGAGPAIHLPIFDNGRLKADLAG
ATAGVDLATADYNQRVVGAVREAADAIAGITALAQERARTAEVVRGFAETNRLNAVRVAS
GLDSQLSLIDTDVRLLDAERAQTNLAADAARQRVALVLALGGGFSSQEPAR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaccccctatatctttaagccgaaacccgccctgctgctcgcgctgctggcgagcgca
tgcgcggtgccgcacagtccgcctgcggtcgcaccggtcgcgcccgcgtcgctggggctt
gccgccgacgcgtcgcccgccatcgcggacgattggtggacggcgttcggcgatcctcag
ctcgaccgcctcgtcgccgacgcgacgaaggaaaatcccaatctcgacgccgcgctcgcc
cgtgtcgcgcaggcgcaggcgatgctggcggcgcgtgatgcggagcgcggccccgacgtg
acgttcgacggatcggcacaggtctcgcgcctgtcgggccgctacaccatcccgccgccc
tatgccggatcggtgcgcttcctcggcagtgcgcaggcgaacctcaactggaacctcgac
ctgttcggccgccagaaggccgcaatcgagggcgcgcgcgcctccgcccgcgccgccgcg
ctcgacgtcgccgccgcgcgcctcgcgatcgcggggtcggtggtgcagacctatatcgac
ctcgcgcgcgccgaagcgcaggcgacgctcgcccgccgcacgatcgcgacgcgcgaacgg
tcggtgcagctggtcgacgtgcgcatccgcaaccgactggcgagcaatctgcaggcgacc
gccgcgcagacgctcctgtcgcaagcgcgcgtcgcgctggcggaggcggacggcgcccgc
gcccgtgcggtgaacgcgctggcggcgctcgccggccgcggccccgattatgccgccgcg
atccgcccggcgacgctgcgcctcgacaccgccttgccgctgcctgcgcgcgtccccgcc
gacctgatcgcgcgccgcccggacatcgcggccgcactggcacggatcgaggccgccgcc
gccggccgccaggtcgcgcgccgcgctttctatcccaacatcaacctcgccgcgttcgcc
ggcttccaggcggtcggccttggcaacctcttcagcctcgatgccggtacggcgggcgcg
ggaccggcgatccatctgccgatcttcgacaacggccggctgaaggcggatctcgccgga
gcgaccgcaggcgtcgaccttgccaccgccgactataaccagcgcgtcgttggcgcggtg
cgcgaagcggcggatgcgatcgccggcatcaccgcgctggcgcaggaacgcgcccgcacc
gccgaggtggtacgcggctttgccgaaaccaatcgcctcaatgcggtgcgcgtcgccagc
ggcctcgatagccagctgtcgctgatcgacaccgacgtccggctgctcgacgccgaacgc
gcccagaccaaccttgccgccgatgcggcccgccagcgcgttgcgctggtgctggcgctc
ggcggtggcttttcctcccaggaacccgcccgatga
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