Spirosoma oryzicola: LQ777_13510
Help
Entry
LQ777_13510 CDS
T08981
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
soq
Spirosoma oryzicola
Pathway
soq01501
beta-Lactam resistance
soq01503
Cationic antimicrobial peptide (CAMP) resistance
soq02020
Two-component system
soq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LQ777_13510
09132 Signal transduction
02020 Two-component system
LQ777_13510
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQ777_13510
01503 Cationic antimicrobial peptide (CAMP) resistance
LQ777_13510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_13510
02044 Secretion system [BR:
soq02044
]
LQ777_13510
01504 Antimicrobial resistance genes [BR:
soq01504
]
LQ777_13510
Transporters [BR:
soq02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ777_13510
Secretion system [BR:
soq02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LQ777_13510
RTX toxin transporter
LQ777_13510
Multiple protein transporter
LQ777_13510
RaxAB-RaxC type I secretion system protein
LQ777_13510
Antimicrobial resistance genes [BR:
soq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LQ777_13510
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LQ777_13510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UHG89261
LinkDB
All DBs
Position
3177134..3178465
Genome browser
AA seq
443 aa
AA seq
DB search
MKCRIVFVLCIFVFINPALRAQTITLAQAQEQAIQQNRRLKIARYKVDETSYKITEARSR
LYPLIVANGMYTYNGVTQDLTLPRGSISVLPGATPIPLPQQDLTLFRAKHHLFLGNVLAY
QPISLLGKIKDGIKVAQADVDLANTQVSQAELAIRQGVEKLYFGLLIAQKQQQQALATIA
LTQAKLYDLESALLAGKTDPVNKVGLQADLANQQQQLLQTNNQIEDYTADLNELMGQPTG
TALTPTPLADSLPVLPPVETFLERAKSGNLEVRQADQTSQKASLGVQAARKDYIPTVGAV
GGYLFQNVISDLPQSNYFLGLQVSYTIVDFGRRKASLNQRLSQQKQADENRQYTQEHITG
EVEKAYRKARQAAALLPVAAQAAQYRRDEFKLKNDRLIAGLALKRDVLETQAALTKAEVD
LYAAQLAYRLAVSDLHLLTGTLR
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtcgtatcgtattcgtactctgtattttcgtattcatcaacccagcgctccgg
gcgcagacgatcacgcttgcccaggcgcaggaacaagctattcagcaaaaccgacgcctt
aaaattgcccgctacaaggtggacgaaacaagctataaaattacggaagcgcgcagtcgg
ctttacccgttgatcgtcgccaacggcatgtacacctacaacggtgtcacgcaggatctg
accttgccgcgcggttctatcagcgtgttacccggtgcaacgcccatcccgttaccgcag
caggacctgaccttgttcagggcaaaacatcatctatttctcggcaatgtgctggcgtat
caacccatcagcctgctcggaaaaattaaggacggcattaaagtagcccaggccgacgtt
gatttagccaacacgcaggttagccaggcggagctggcgattcggcaaggggtagaaaaa
ctgtatttcggtctgttgattgctcagaagcagcagcaacaggctttagccaccattgca
ttgacgcaggcgaagctatacgatctggaaagtgccctgctggctggtaaaaccgacccg
gtcaacaaagtaggattacaagccgatctggcgaaccagcagcagcagcttctgcaaacc
aacaaccagatcgaagactataccgccgatctgaacgaactgatggggcaacccactgga
acggccttgaccccaacaccactagccgattcgctgccggttcttcccccggtcgaaacg
tttttagagcgggccaaaagcggtaatctagaggttcgtcaggccgaccagaccagccag
aaagcgtcgcttggcgtacaggccgcccggaaggattacattccaaccgtcggggccgtt
ggtggttatttgttccagaatgttatttccgaccttccgcagagtaattactttctgggc
ttgcaggtaagctatactatcgttgatttcggtcggcgcaaagcgtcgcttaaccagcga
ctttcgcagcagaagcaggccgacgaaaaccggcagtacacccaggaacacattaccggc
gaagtcgagaaagcgtaccgaaaagcccgacaggcggcagcgctgctacccgttgcggct
caggcggctcaataccggcgcgatgaattcaagctaaagaatgatcgattgattgctggt
ctagcgctcaagcgtgatgtgctggaaacacaggccgccctcaccaaagccgaagttgat
ttgtacgcagcacaactagcctatcgcctggctgtctccgatttgcacctgttaacaggc
acactccgctaa
DBGET
integrated database retrieval system
