Spirosoma oryzicola: LQ777_27645
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Entry
LQ777_27645 CDS
T08981
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
soq
Spirosoma oryzicola
Pathway
soq01501
beta-Lactam resistance
soq01503
Cationic antimicrobial peptide (CAMP) resistance
soq02020
Two-component system
soq03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LQ777_27645
09132 Signal transduction
02020 Two-component system
LQ777_27645
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQ777_27645
01503 Cationic antimicrobial peptide (CAMP) resistance
LQ777_27645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_27645
02044 Secretion system [BR:
soq02044
]
LQ777_27645
01504 Antimicrobial resistance genes [BR:
soq01504
]
LQ777_27645
Transporters [BR:
soq02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ777_27645
Secretion system [BR:
soq02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LQ777_27645
RTX toxin transporter
LQ777_27645
Multiple protein transporter
LQ777_27645
RaxAB-RaxC type I secretion system protein
LQ777_27645
Antimicrobial resistance genes [BR:
soq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LQ777_27645
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LQ777_27645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UHG94361
LinkDB
All DBs
Position
unnamed4:complement(143657..145057)
Genome browser
AA seq
466 aa
AA seq
DB search
MVVNHVKRIIYGIVGLIGTCGQVQAQDPVVQRLTLPQAMELTQQNYPSIKAKQAQQEAAN
YQAEAVRNQRLPEVQFQDQHTFASFNNLAGAYFPNEGSVIPVSGAARPASWQGVWGSFTS
LLVNWRVFNFGRLQANEAVARRGQQASQADTENEIFQQQVRVADAYLNWLVLHRVVAVQQ
ANLARTQQFEQAVTTRAAAGLRPGVDSSVARAESAKARLLLLESRQNEQTQLLQLHEMMG
VRSGVYQPDTSFYSRQPQLALESANAGEAPSLRFLQAQAEQSQAQAEAIRKSYWPSIFVL
GSFGGRGSGIDNLTGEVSGNFGQGIPYRIGNYLVGVSTRWNLSALPRIRNETRAEQLRGD
VFRQQYRQEQLRLNRQSETADLRTAYARQQLLEAPIQTTAARNAYTQATTRYQTGLGTLV
EVAQSFVLVNRAEVDEAVANNNLWRSLLLKAAAQGDLSVFLNQLTH
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttaatcacgttaaacgaattatatatggtatcgtaggtctgatcggaacctgc
ggtcaggtgcaggcgcaggacccagttgttcaacggctaaccttgccgcaggcaatggaa
ctgacgcagcagaactatccatccatcaaagccaaacaggcccagcaggaagccgccaac
taccaggccgaagctgtccgtaaccagcggctgcccgaggtgcagtttcaggatcagcac
accttcgccagtttcaacaacctggccggtgcgtacttcccgaatgaagggtcggtgatt
ccggtttcgggggcggcccgtcccgccagctggcagggcgtttggggcagctttaccagc
ctgctggtcaactggcgcgtatttaatttcgggcgtctgcaagccaacgaagccgtggcc
cggcgggggcagcaagcgagtcaggccgataccgagaatgagatctttcagcagcaggtc
cgggtggccgacgcgtacctgaactggctggtactgcaccgggttgttgccgttcagcag
gctaatctcgcgcgtacgcaacagtttgaacaggccgtcaccacgcgggcagccgctggc
ctgcgacccggtgtagattcatcggtggcacgggccgaatcggcgaaagcgcggctgctg
ttgctcgaaagtcgtcagaatgaacagacgcaactgctgcaacttcacgagatgatgggc
gttcgaagcggtgtctaccaaccggatacgtcgttctacagccgtcagcctcaactggcc
ctcgaatcggctaatgctggcgaagcgccatcgctgcggttcttgcaggcgcaggctgag
cagtcacaggcgcaggccgaagccattcgaaagtcctactggccgtccattttcgtgctg
ggttcgttcgggggacggggttcgggcatcgacaacctaacgggcgaggttagcggcaac
ttcggtcaggggataccgtatcgaattggcaattacctggtcggcgtgtcaacccgctgg
aatctgtcggcgctaccccgcattcgcaacgaaacccgggcggagcagctccggggtgat
gtgttccggcagcagtatcgacaggaacagcttcgcctaaatcgccagtctgaaacggct
gatttacgcaccgcctatgcgcggcagcaactgcttgaagcgccgatacaaaccacggcg
gcccggaatgcctacacgcaggcgacgacacgctaccagaccgggctgggtacgttggtc
gaagtagcgcagtcgtttgtgctcgtgaaccgggcagaggtagacgaggccgtcgccaac
aacaacctgtggcgatcgctcctgctgaaagccgctgcccagggcgacctgtctgttttt
ctgaatcaacttactcactga
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