Spirosoma oryzicola: LQ777_28470
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Entry
LQ777_28470 CDS
T08981
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
soq
Spirosoma oryzicola
Pathway
soq01501
beta-Lactam resistance
soq02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LQ777_28470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LQ777_28470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
soq02000
]
LQ777_28470
01504 Antimicrobial resistance genes [BR:
soq01504
]
LQ777_28470
Transporters [BR:
soq02000
]
Other transporters
Pores ion channels [TC:
1
]
LQ777_28470
Antimicrobial resistance genes [BR:
soq01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LQ777_28470
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LQ777_28470
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LQ777_28470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UHG94526
LinkDB
All DBs
Position
unnamed5:142470..143906
Genome browser
AA seq
478 aa
AA seq
DB search
MTTTQKTRWHRPTLGLLGLACLLLVSACKVSKDVPMPTLGLPATYRTAPNADTSSVAGLP
WRSFFTEPALQQLLDSATVRNNDLQLAIQNITSAQVALRQARLGNVPAVTLQAGVTTNRP
SANSLNGISYRQFLGVNHLEDYNLAAVVSWEADIWGKIRSRKAEALAAYLQSQEARKAVQ
TQVVAQVAEGYYNLLMLDTQLAVARRNAALTDSTLAITQLQFTAGQVTSLAVQQIEAQRL
TAAGLIPAYEQAITVQEHALSTLVGRLPGDVRRSGNLLAMEVPMIAAAGVPSALLSQRPD
VRSAELALERANAAVGYTKAQLYPTLAITTQGGLNAFQASNWFSIPASLFGLATGGITQP
LLQRRALRTQYELSRIDRERTVIQFRQQVLVAVGEVSNALSQITKTQTQQALASDRVRAL
RQATSNANLLFRSGLATYLEVLTAQSNALQSELELASLKRTQLEANVELYRAVGGGWQ
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgacgactacccaaaaaacgcgctggcaccgccccaccctagggctcctagggctggct
tgcctgctactggtttcggcctgcaaagtgtcgaaagacgtgccgatgccgacgctgggg
ctacccgctacctaccgcacggctcccaacgccgatacgagttccgtggcaggcttgccg
tggcggagcttcttcaccgagccagccctgcaacaactgctggatagcgctacggtgcgc
aacaacgacctacagctagccatccaaaacattacgtctgcgcaggttgctctccggcaa
gcgcggttgggcaatgtgccggccgtgaccctgcaggctggcgtgaccaccaaccggccc
tcagccaacagtctgaacggcatttcttaccgtcagttcctgggggtcaatcacctcgaa
gactacaatctggccgcggtcgtgagctgggaagccgacatttggggcaaaatacgcagc
cgcaaggcagaggccctggcggcttacctgcaaagccaggaggcccgcaaagcggtgcaa
acccaggtagtggcccaggtagcagaagggtattataacctgctgatgctggacacccaa
ctagccgtagcccggcgtaatgcggcgcttacggacagtacattagcgattactcaactt
caatttaccgccggccaggtgacgtccctggccgtccagcagatcgaggcccagcggctg
accgcggctggtttgattccggcttatgagcaggccattaccgtgcaggaacatgccctg
agcacactggtgggacggttgccgggcgatgtccggcgctcgggtaacctgctggcgatg
gaggtgccgatgatagccgcggctggggtaccctcggcgctcttgagccagcggcccgat
gtacgcagtgccgaactggcgctggaacgagccaatgcagctgtggggtataccaaagcg
cagctttacccgacgctggccatcacgacccagggggggcttaacgccttccaagccagt
aactggttcagcatcccggcctccctgttcgggctggcgaccggggggatcacccaaccg
ctgctccagcgccgggcgctgcgcacccagtatgagctcagccggattgaccgggagcgg
acggtcattcaatttcgtcagcaggtactggttgccgtgggcgaagtatccaatgcgttg
agtcaaatcaccaaaacgcagacccagcaagctttagcgtcggaccgtgtccgcgccctg
cgccaggccaccagcaatgccaatctcttattccgtagtggcctggctacctacctggaa
gtcttgacggctcaaagtaatgcgctgcaaagtgaactggaactggcttcgctgaaacgt
acccagttggaagcgaacgtggagctgtaccgagccgtgggtggcggctggcagtag
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