Sphingobium sp. AntQ-1: sphantq_01159
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Entry
sphantq_01159 CDS
T10291
Symbol
gdhB
Name
(GenBank) NAD-specific glutamate dehydrogenase
KO
K15371
glutamate dehydrogenase [EC:
1.4.1.2
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag00220
Arginine biosynthesis
spag00250
Alanine, aspartate and glutamate metabolism
spag00430
Taurine and hypotaurine metabolism
spag00910
Nitrogen metabolism
spag01100
Metabolic pathways
spag01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
sphantq_01159 (gdhB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
sphantq_01159 (gdhB)
00220 Arginine biosynthesis
sphantq_01159 (gdhB)
09106 Metabolism of other amino acids
00430 Taurine and hypotaurine metabolism
sphantq_01159 (gdhB)
Enzymes [BR:
spag01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.2 glutamate dehydrogenase
sphantq_01159 (gdhB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_GDH_CD
GDH_C
GDH_ACT1
GDH_HM3
GDH_ACT3
GDH_ACT2
GDH_HM2
GDH_HM1
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
WCP12755
LinkDB
All DBs
Position
1:1174522..1179186
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AA seq
1554 aa
AA seq
DB search
MTALAEAKNKEVDKTIHEALEGALSRGALPGESEGFDAAALAAAAAFLGRAANGRKAGQA
AIMVETLGEGANGRFMRLAIVNDDMPFLVDSIANTLAAADITIHRLFHPVLSVTRDGDGA
LSAILDDDTPGARRESMIYVETDRADAKARRALEKSLQETLADVRAAVADWPKMQAAMAA
DADAVPDEEGAALLRWFLARHFTQTGHEIIQRDGGSSAPLGICTRHDRPLIAPASLEAAF
SWFEEGKRTPLIIKSSRISRVHRLVLLDLVIIPVRDGKEVKALSIHAGMWTSTGLSATPD
KVPLLRSALSTLMDKFGFDPLGHAGKTLAHALTALPHDITIGFDRETLERLALTFMSLTD
RPRPKLALATSALARHLYAFVWLPRDELSTARRVAVQDMLAQAANGPVLSWSIALEEGGL
ALLRITLDLREGGVVPDDAALDRQLKQMVRGWVPAVEEALAETEEAGRAAALAQRFAPGF
PLAYRNGAGPLEAAIDIRLLHGLSGEGDKSIRIYRNAEDCNERLRLKLYSSHTVALSEVV
PVFENFGFRVIEEMTTAVDNGALGHVQRFVLELPAGGDAQAVVARAGVVTEAIAQVLEGR
AENDRFNELIVTASLSPRSVVLFRALYRYLRQTGVAYGMATFAETLRKAQGVTANLINLF
EALHDPAAQDGAADRIAQAQAAIEAGLEQVTAIDEDRVLRLLRAVITATLRTNFYAPAAQ
EALAFKLDSAQVPGLPAPLPWREIWVYSPRVEGIHLRAGPVARGGLRWSDRRDDFRTEIL
GLMKAQRVKNAVIVPTGAKGGFYPKQLPSPQVDRDAWLAEGTESYRIFIRSLLSITDNIV
KNKVKHPAQVVINDGDDPYFVVAADKGTATFSDVANAIALDRDFWLGDAFASGGSNGYDH
KAMGITARGAWISVQRHFAEMGIDVQSEPVSVVGCGDMSGDVFGNGMLLSKAIKLVAAFD
HRHIFFDPTPDPAKSWEERHRMFALPRSSWEDYDKALISKGGGVFSRSLKRIALTPEMQT
VLDVTDKEMEPAALISAILKAPADLLWFGGIGTYVKAAGQSHGDVGDPANDRLRINAEQL
RVKVVGEGANLGVTQAGRIAFSLHGGRINTDFIDNSAGVDCSDNEVNIKIALNKEMIEGR
LPFDKRNALLESMTDAVGDIVLEDNRLQALGLSIAEAGGAADLASYVRLIETFEETGRLD
RQVEGLAANDQLLRRGQDGQGLTRPELAVLLSTAKLALQDAIEHGDLATDDSMTGELMAA
FPAAMQKKEADAIAAHALRKEIIATKVANRIVNRLGLIHPFELAEEEGCSMADLASAFLI
AERLYDIGALWADIDAADMSEGARLALFSDIAGGMRAQIADILRALPAGTLPSEGHDRLS
KGVGTLAAQVDDLLTSEAQRRTNAVTDRLLGLGAPETLALRTAGLFKLDGAVGIAALAAR
MGVEEVALTRAFTHLGEAVGIDWVQSAAARMEPTDPWERLLISGVARDMQQVRLDFLAQG
KGKDIVTHVENWLQAKGARVRQFRTLVQRAKAAATPNVAMLAEIAGQARGLLGR
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgctggcggaagcgaagaacaaggaagtcgacaagaccatccatgaggcgctg
gaaggcgctctcagccggggcgccctgcccggcgaaagcgaggggtttgacgcggcagcg
ctggccgccgccgccgctttcctcggacgcgccgccaatgggcgcaaggcgggccaggcc
gcgatcatggtcgaaacgctgggcgaaggcgccaatggccgcttcatgcgcctggccatc
gtcaatgacgacatgccgtttctggtcgattccatcgccaatacgctggctgcggccgac
atcaccattcaccgcctgttccatcccgttctgtcggtgacgcgcgacggcgacggcgcg
ctgtccgccatattggacgacgacacgcccggcgcgcggcgcgaatccatgatctatgtc
gaaaccgacagggccgacgcgaaggcgcgccgcgcgctggaaaaatcgttgcaggagacg
ctggcagacgtacgcgccgccgtggcggactggcccaagatgcaggcggccatggccgcc
gatgcggacgccgtgccggacgaggaaggcgcggccctgctgcgctggttcctggcgcgg
catttcacccagaccgggcatgagatcatccagcgggacggcggcagcagcgcgccgctc
ggcatctgcacccggcatgacaggccgctgatcgcccccgcctcgctggaggcagccttc
tcctggttcgaggaaggcaagcgcacgccccttatcatcaaatccagccgcatctcgcgc
gtgcatcgcctggtgctgctcgacctggtcatcattccggtgcgggacggaaaggaggtc
aaggcgctgtcgatccacgccggcatgtggaccagcaccggcctgtcggcgaccccggac
aaggtgccgctgctccgctcggcgctctcgaccctgatggacaagttcggcttcgatccg
ctcggccatgccggcaagacgctggcccatgcgctgaccgccctgccgcacgacatcacc
atcggcttcgaccgcgaaacgctggagcggctggcgctgaccttcatgtcgctgaccgac
cggccacgcccgaagctggcgctcgccaccagcgcactggcccgccatctctatgccttc
gtgtggctgccgcgcgacgaattgtcgaccgcccgtcgcgtagcggtgcaggatatgctc
gcgcaggcggcgaacggcccggtgctcagctggtcgatcgcgctggaggaaggcggcctg
gcgctgctgcgcatcacgctcgacctgcgcgaaggcggggtagtgcccgatgacgccgcg
ctcgaccgtcagctcaagcaaatggtgcgcggctgggtgccggccgtcgaggaagcgctc
gccgaaacagaggaagctggccgcgccgcagcgctcgcgcagcgtttcgctcccggcttc
ccgctcgcctatcgcaatggcgctggcccgcttgaggccgcgatcgacattcgcctgctt
cacggcctgtcgggtgaaggtgacaagtcgatccgaatctatcgcaacgcggaagactgc
aacgaacgcctgcggctcaaactctacagcagccatacggtcgccctgtccgaagtggtg
ccggtgttcgagaatttcggtttccgcgtgatcgaggaaatgaccaccgcggtcgacaat
ggcgcgctcggccatgtccagcgtttcgtgctggaactgcccgccggcggcgacgcgcag
gcagtcgtggcgcgcgccggcgtcgtgacagaggcgatcgcgcaggtactcgaaggacgc
gccgaaaacgaccggttcaacgaactgatcgtcaccgccagcctgtcgccgcgctcggtc
gtgctgttccgcgcgctctaccgctatctgcggcagaccggcgtcgcctatggcatggcg
accttcgccgaaacgctgcgcaaggcgcaaggcgtcacagccaacctcatcaacctgttc
gaagcgctgcatgatcccgccgcgcaggacggcgcggccgaccggatcgcccaggctcag
gcggcaatcgaggcgggtctggagcaggtcaccgcaatcgacgaggaccgcgtgctgcgc
ctgctgcgcgccgtcatcaccgccacgctgcgcaccaatttctacgcccctgcggcgcag
gaagcgctggcgttcaagctcgacagcgcgcaggtgcccggcctgcccgcgcccctcccc
tggcgcgaaatctgggtctattcgccccgcgtggagggcatccacctgcgcgccggtccg
gtggcccgcggcgggctgcgctggtcagaccggcgcgacgatttccgcaccgaaatcctg
ggcctgatgaaggcgcagagggtcaagaacgccgtcatcgtgccgaccggcgcgaagggc
ggcttctatcccaagcaattgcccagcccccaggtcgatcgcgacgcctggctggccgaa
ggcacggaaagctatcgcatcttcattcggtccctgctgtcgatcaccgacaatatcgtg
aagaacaaggtgaagcaccccgcgcaagtcgtcatcaacgacggcgatgatccctatttc
gtcgtcgcggcggacaagggcaccgccaccttctccgacgtcgccaacgcgatcgcgctg
gaccgcgatttctggctgggcgacgccttcgccagcggcggctccaacggttacgatcac
aaggcgatgggcatcaccgcgcgcggcgcctggatcagcgtacagcgtcacttcgccgaa
atgggcatcgatgtgcagagcgaaccggtcagcgtcgtgggctgcggcgacatgtcgggc
gacgtgttcggcaacggcatgttgctcagcaaggcgatcaaactggtcgccgcctttgac
catcgccacatcttcttcgatcccacgcccgatccggcgaagagttgggaagagcgccac
cggatgttcgccctgccccgctccagctgggaggattatgacaaggcgctcatctccaag
ggcggcggcgtcttctcgcgcagcctcaagcgtatcgcgctgacgcccgaaatgcagact
gtgctcgacgtcaccgacaaggaaatggagccggccgcgctgatctccgccatcttgaag
gcgccggccgacctgctctggttcggcggcattggcacttatgtaaaggccgcggggcaa
agccatggcgatgtcggcgatcccgccaacgaccgcctgcgcatcaacgccgaacaactg
cgcgtcaaggtggtgggcgaaggcgcaaatctgggcgtcacccaggctggccgcatcgcc
ttctcgctccatggcggccggatcaacaccgacttcatcgacaatagcgctggcgttgac
tgttcggacaacgaagtgaacatcaagatcgcgctgaacaaggagatgatcgagggtcgc
ctacccttcgacaagcgcaacgcactgctcgaaagcatgaccgacgcggtcggcgacatc
gtgctggaggataaccgcctccaggcgctcggcctttccatcgccgaagcgggcggcgcg
gccgaccttgcctcctatgtccgcctgatcgagacgttcgaggaaaccggccggctcgac
cgtcaggttgaagggctggccgccaacgaccagttgctgcgtcgcggccaagacggccag
gggctgacccgccctgaactggccgtcctgctctcgaccgccaagctggcgttgcaggat
gcgatcgaacatggcgatctggcgaccgacgacagcatgaccggcgagctcatggccgcc
ttccccgccgcaatgcagaagaaggaagccgatgccatcgccgcccatgcgctgcgcaag
gaaatcatcgccaccaaggtcgccaaccgtatcgtcaatcgcctgggcctcatccatccg
ttcgaactggcggaagaagaaggctgttcgatggccgaccttgccagcgccttcctgatc
gccgaacggctttacgacatcggcgcgctctgggcggatatcgacgcggcggacatgtcg
gaaggcgcccgcctcgccctgttcagcgatatcgcgggcggcatgcgcgcgcagattgca
gacatattgcgcgccctgcccgccgggacgctgcccagcgaagggcatgatcgcctgtcc
aagggcgtcggcaccctggccgcccaggtcgacgatctgctgaccagcgaggcgcagcgt
cgcaccaatgccgtcaccgaccggctgctcggccttggcgcgcccgaaaccctggcgctg
cgcacggcggggctgttcaagctagacggcgcggtcggcatcgccgctctcgccgcgcgc
atgggcgtggaggaagtcgcgctcacccgcgccttcacccatctgggcgaagcggtcggc
atcgactgggtccagtccgcggccgcgcggatggagccgaccgatccgtgggaacggctg
ctcatttccggcgtcgcccgcgacatgcagcaggtccggctcgatttcctggcccagggg
aaggggaaggatatcgtcacccatgtcgagaactggttgcaggccaagggcgcccgcgtc
cgccagttccgcaccctggtccagcgcgccaaggcggccgcgacgcccaacgtcgcaatg
ctcgccgagatagcaggccaggcgcgcggcctgctggggcggtaa
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