Sphingobium sp. AntQ-1: sphantq_03615
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Entry
sphantq_03615 CDS
T10291
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
spag Sphingobium sp. AntQ-1
Pathway
spag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
sphantq_03615 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spag03400
]
sphantq_03615 (nth)
Enzymes [BR:
spag01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
sphantq_03615 (nth)
DNA repair and recombination proteins [BR:
spag03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
sphantq_03615 (nth)
Prokaryotic type
sphantq_03615 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WCP15156
LinkDB
All DBs
Position
1:3639972..3640634
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AA seq
220 aa
AA seq
DB search
MKKADIFDFFSRLAEANPAPVTELEYGNPYQLLVAVTLSAQATDVGVNKATRALFREVET
PQQMVDLGEEGLKAHIKTIGLFNTKAKNVIGLSAILVRDFGGEVPEDRDTLTTLPGVGRK
TANVVVNTAFGQETFAVDTHIFRVGNRTGLAPGKTVLAVEQQLDKKVPGPFRRDAHHWLI
LHGRYVCKARKPECWRCIVADLCRFKPKTPAPKIATAKAA
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggccgatatattcgactttttcagccgcctggccgaagccaatcccgcgccg
gtgaccgagctggaatatggcaatccctatcagttgctggtcgcggtgacgctgtcggcg
caggcgaccgatgtcggggtgaacaaggcgacccgcgcgctgttccgcgaggtcgagacg
ccgcagcagatggtcgacctgggcgaagagggattgaaggcgcatatcaagaccatcggc
ctgttcaataccaaggcgaaaaatgtcatcggcctgtcggcgatattggtgcgcgatttc
ggcggcgaggtaccggaggatcgcgacacgctgaccaccctgcccggcgtcgggcgcaag
accgccaatgtggtggtcaacaccgccttcgggcaggagacgttcgcggtcgacacccat
attttccgcgtcggcaatcgcaccgggttggcgccgggcaagacggtgctggcggtcgaa
cagcagttggacaagaaagtgcccggcccgttccgccgcgatgcgcatcactggctgatc
ctgcatggccgttatgtgtgcaaggcgcgcaagcccgaatgttggcgctgcatcgtcgcc
gatctgtgccggttcaagcccaagacgcctgcgcccaagatagcgactgcgaaggccgct
tag
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