Shewanella putrefaciens CN-32: Sputcn32_3169
Help
Entry
Sputcn32_3169 CDS
T00513
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
spc
Shewanella putrefaciens CN-32
Pathway
spc01501
beta-Lactam resistance
spc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sputcn32_3169
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sputcn32_3169
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spc02000
]
Sputcn32_3169
01504 Antimicrobial resistance genes [BR:
spc01504
]
Sputcn32_3169
Transporters [BR:
spc02000
]
Other transporters
Pores ion channels [TC:
1
]
Sputcn32_3169
Antimicrobial resistance genes [BR:
spc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sputcn32_3169
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Sputcn32_3169
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Sputcn32_3169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABP76881
UniProt:
A4YA98
LinkDB
All DBs
Position
complement(3689709..3691124)
Genome browser
AA seq
471 aa
AA seq
DB search
MNNLILNRKIMLRTCAIAVGVALLGGCGSFMRSDFEPLALTIPSHWQHTQVNEQVRVDPW
WQQFQQPDLNKLVSQVLSSNNDLALATLTLRKARLQAGLAQDALYPQLSSNLSASRSNPL
DGGESTKSYQAKLSVSYEVDLWGKVSAEMDQAQWSALASAEDRESTTQSLVATTASLYWK
MGYLNQRIALSSRSIDHSRQTLALTQRQYASGAVTQVNVLEAKRSLAGQEASHSQLIQQL
TEAGNALAILLNQTPGEAFVEINALPDVAVPEIAVGMPADLLVRRPDVKASLYQLRSALA
SKDATYTRYFPSLSLTGSVGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQINNDIAEI
DYQTAVVNYRKTLYSAFEDVDNAISAKQQFAYQGDKLQQQYNAAVAVEAIYESQYRHGAI
GIQDWINAQENRRAAEASLLENRYNQLTAQATLYQALGGSDIAPEIAQISN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaataatctaatattaaatcgtaaaattatgttacgtacttgcgccatcgctgtaggt
gttgcattactcggcggctgcggtagttttatgcgctcagactttgagcccctcgcgttg
acgataccaagtcattggcagcatacacaggtcaacgaacaggtgagagttgatccttgg
tggcagcagtttcagcagccagatcttaataagttagtaagccaagtgctaagcagtaac
aatgacttagcccttgcaaccttgacactacgtaaggcgcgtttacaggcagggcttgcc
caagatgcactttacccgcagttatcctcaaacctttctgcatcgcgcagtaacccccta
gatggtggcgaatcaaccaagagctatcaggccaagctttcagtcagttatgaagtcgat
ttatggggaaaagtctcggcagagatggatcaagctcagtggtcggcattagcgagtgcg
gaggatagagaaagtaccactcaaagtttagtggcaactacagcatcgctttattggaag
atgggctatttaaatcaaaggattgctttaagcagccgcagtattgaccacagtcgacaa
acactggcattaacccagcgtcagtatgcttctggtgcggtgactcaagtcaatgtgtta
gaggccaagcgtagcctagcgggacaagaggcatcccatagtcaacttattcaacagtta
acggaggcgggaaatgcgcttgccattttactgaatcaaacacctggagaggctttcgtt
gagattaacgccttacctgatgttgcagtgccggagattgccgtggggatgccagcggat
ctattggtgagacgccctgatgtgaaggcatctttatatcaattacgttcagcactcgcc
agtaaagatgcgacttatacccgttactttccgagtttgagtttaaccggcagtgtgggg
gagtcgacctcagagttaaaagaattattgcgcaatccagttggtagtttaggtgcaggc
ttagtgttgccatttttacagtggaatcaaatgcaaattaataacgacattgctgaaatt
gattatcaaactgcagtcgtaaattaccgtaagacactgtattccgcctttgaggatgtt
gataatgccatctcggctaagcagcaatttgcttatcaaggagacaaattacagcaacag
tataatgctgcggtagcggtcgaggccatttatgaaagccagtatcgccatggtgcgata
ggtattcaagattggattaatgcccaagaaaatcgacgtgcagcggaggcgtctttgctc
gaaaaccgctataaccaactgacggcccaagcaacgctctaccaagcccttggtgggagc
gatatcgccccagagattgctcagatttctaactaa
DBGET
integrated database retrieval system
