Rhizorhabdus wittichii DC-6: HY78_01875
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Entry
HY78_01875 CDS
T05200
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd01501
beta-Lactam resistance
sphd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HY78_01875
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HY78_01875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_01875
01504 Antimicrobial resistance genes [BR:
sphd01504
]
HY78_01875
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_01875
Antimicrobial resistance genes [BR:
sphd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HY78_01875
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HY78_01875
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HY78_01875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
P7_N_core
Motif
Other DBs
NCBI-ProteinID:
ARR52291
LinkDB
All DBs
Position
complement(363648..365042)
Genome browser
AA seq
464 aa
AA seq
DB search
MRAERGVAMLALAMLAGCSMAPAYRPPQTPAPESFKEVEGWAAATPMDGAPRGDWWTAFD
DPVLDDLIARAARASPTLEAALARYNQARAAARIESADLFPQIAAGADAGRQRVSGNRFN
GNGTAQTYDQYTVGATLDYEVDLWGRIRNGARAARADAEASGDDLASARLSLQTAVADAY
ARLRGLDAEAALLRQTVDAFGKAYDLTAKRHNGGIASGIDVNRARTVLDNARAQISAIAN
QRAATEHEIAALVGAVASDFAIPVRDQPLLSPAMPSGAPSALLQRRPDIAAAERRMFAAN
ARIGVARAAFFPTLTLGLAGGWQTTHGELFAAPNGFWGLGPASALLSLFDGGRRKAEVRL
SRAEYDELAADYRGTVLTAFREVEDALAASRHLADQIAQQRSAATAAERTSQLALTRYRD
GAADYLEVVTAQTDALDARRALLSAETQRMRASVALVRALGGAA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgagcgcggcgtcgcgatgctggcgctggcgatgctcgcgggctgctcgatg
gcgcctgcctatcgcccgccgcagacgccggcgccggagagcttcaaggaggtcgagggt
tgggctgccgcgacgccgatggacggcgcgccgcgcggcgactggtggacggcgttcgac
gatcccgtgctcgacgacctgatcgcgcgcgccgcgcgggcgagcccgacgctggaggcg
gcgctcgcccgctacaaccaggcgcgcgcggcggcgcggatcgagtccgccgacctgttc
ccgcagatcgcggccggcgccgatgcgggccgccagcgcgtgtcgggcaaccgcttcaat
ggcaacggcaccgcccagacctacgaccagtacacggtcggcgcgacgctcgactatgag
gtcgacctgtggggccgcatccgcaacggcgccagggcggcgcgcgccgatgccgaggcg
agcggtgacgacctcgcctcggcccggctcagcctccagaccgccgtcgccgacgcctat
gcgcggctgcgcgggctcgacgccgaggcggcgttgttgcgccagaccgtcgacgccttc
ggcaaggcctatgacctgaccgcgaagcgccacaatggcggcatcgcctcgggcatcgac
gtcaatcgcgcgcggaccgtgctcgacaatgcccgcgcgcagatttcggcgatcgccaac
cagcgcgcggcgaccgagcatgagatcgccgcgctggtcggcgcggtggcgtcggacttc
gcgatcccggtgcgcgaccagccgctgctgtcgccggcgatgccgtccggagcgccgtcc
gccctgctccagcggcggcccgacatcgccgcggccgagcggcggatgttcgccgccaat
gcccggatcggggtcgcgcgggccgccttcttcccgacgctgacgctcggcctcgccggt
ggctggcagaccacgcatggcgagctgttcgcggcgcccaacggcttctgggggctcggg
ccggcctcggcgctgctgtcgctgttcgacggcgggcggcgcaaggcggaggtgcgcctg
tcgcgcgccgaatatgacgagctggcggccgactatcgcggcaccgtgctgaccgccttc
cgcgaggtcgaggacgcgttggcggcgagccgccacctcgccgaccagatcgcccagcag
cgcagcgccgcgacggcggccgagcggaccagccagcttgcgctgacccgctatcgcgac
ggcgcggcggactatctggaggtggtgacggcgcagaccgacgcgctcgatgcgcggcgc
gccctgttgtcggcggagacccagcgcatgcgcgccagcgtcgcgctggtccgggcgctg
ggcggcgcagcctga
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