Rhizorhabdus wittichii DC-6: HY78_20860
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Entry
HY78_20860 CDS
T05200
Name
(GenBank) multidrug transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd01501
beta-Lactam resistance
sphd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HY78_20860
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HY78_20860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphd02000
]
HY78_20860
01504 Antimicrobial resistance genes [BR:
sphd01504
]
HY78_20860
Transporters [BR:
sphd02000
]
Other transporters
Pores ion channels [TC:
1
]
HY78_20860
Antimicrobial resistance genes [BR:
sphd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HY78_20860
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HY78_20860
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HY78_20860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TPR_11
Motif
Other DBs
NCBI-ProteinID:
ARR55718
LinkDB
All DBs
Position
complement(4379181..4380647)
Genome browser
AA seq
488 aa
AA seq
DB search
MPLSRAPFLRPAAVVGLPIALAACASIPDLGTRPELRTPASVAAGQSLGGRTDADWPADG
WWQAYGDPQLAGLIEEGLRESPDAAAAAARFRQARGMAQAAGAPLLPSVGAGASAGLEKQ
SYNVGIPAQFVPKGWQDVGQASIDLSFDLDLWGRNHAALAAATSEAEAARIEQDQARLML
ATGIASAYADLARLHAERDVLAAAVELRAATRKLVGDRVRNGLDTRAELKQADAAVPAAR
ADLAAADEAIALVRNQIAALVGAGPDRGLGIARPALAALHPPGLPAQVTTELIGRRPDIA
AARAQAEAAASRIKVARADFFPAIRLGALVGVRSLGLDQLTDSGSTYGNVTPAVSLPIFR
GGALSGQYRGARGRYDEAVALYNRAVIAAYREVADAVTSQRSATDRLAQSRQALADSEEA
YAIARKRYEGGLSTYLNVLSSEEKLLQARRAVADLDARMFALDVALVRALGGGFTAASPA
LAKDDSHG
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgagtcgcgcgcctttccttcgccctgccgccgtggtcggccttccgatcgcg
ctggccgcctgcgcatcgatacccgatctcggcacccggccggagctgcgcacgcccgcg
agcgtcgccgccggccagagcctgggcgggcggaccgacgccgactggcccgccgacggc
tggtggcaggcctatggcgacccgcagctcgccgggctgatcgaggaagggctgcgcgaa
tcccccgacgccgccgctgccgccgcgcgcttccgccaggcgcggggcatggcgcaggcg
gccggcgcgccgctgctgccctcggtcggcgccggcgccagcgcgggcctggagaagcag
agctacaatgtcggcatccccgcgcagttcgtgcccaagggatggcaggacgtcgggcag
gcctcgatcgacctgtcgttcgacctcgacctgtggggccgcaaccacgcggcgctcgcc
gccgccacctccgaggccgaggcggcacggatcgagcaggaccaggcgcggctcatgctc
gcgaccgggatcgcctcggcctatgccgaccttgcccggctccatgccgagcgcgacgtg
ctggccgcggcggtcgagctgcgcgccgccacgcgcaagctggtcggcgaccgggtccgc
aacggcctcgacacgcgcgccgagctgaagcaggccgacgcggcggtgccggcggcccgt
gccgacctcgccgccgccgacgaggcgatcgcgctggtccgcaaccagatcgccgcgctg
gtcggcgccgggcccgatcgcggcctgggcatcgcccggcccgcgctcgcggcgctccac
ccgcccggcctgccggcgcaggtgaccaccgagctgatcggccgccgcccagacatcgcc
gccgcgcgggcgcaggccgaggccgccgcgagccggatcaaggtcgcgcgggccgacttc
ttccccgccatccggctcggcgcgctggtcggtgtccgctcgctcggcctcgaccagctg
accgacagcggatcgacctatggcaacgtcaccccggcggtcagcctgccgatctttcgc
ggcggggcgctgagcggccagtatcgcggcgcgcgcggccgctatgacgaggcggtggcg
ctctacaaccgggcggtgatcgcggcctatcgcgaggtcgccgacgcggtgaccagccag
cgctccgccaccgaccggctcgcccagtcgcgccaggcgctagccgattccgaagaggcc
tatgcgatcgcccgcaaacgctatgaaggcggcctgtccacctatctcaacgtgctgagc
tccgaagagaagctgctgcaggcgcgccgcgcggtcgccgatctcgatgcccggatgttc
gcgctggacgtcgccctcgtccgcgccctcggcggcggtttcaccgccgcgtcccctgcc
ctcgccaaggacgattcccatggctga
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