Sphingomonas sp. FARSPH: DM480_16385
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Entry
DM480_16385 CDS
T05685
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf01501
beta-Lactam resistance
sphf01503
Cationic antimicrobial peptide (CAMP) resistance
sphf02020
Two-component system
sphf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DM480_16385
09132 Signal transduction
02020 Two-component system
DM480_16385
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM480_16385
01503 Cationic antimicrobial peptide (CAMP) resistance
DM480_16385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_16385
02044 Secretion system [BR:
sphf02044
]
DM480_16385
01504 Antimicrobial resistance genes [BR:
sphf01504
]
DM480_16385
Transporters [BR:
sphf02000
]
Other transporters
Pores ion channels [TC:
1
]
DM480_16385
Secretion system [BR:
sphf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
DM480_16385
RTX toxin transporter
DM480_16385
Multiple protein transporter
DM480_16385
RaxAB-RaxC type I secretion system protein
DM480_16385
Antimicrobial resistance genes [BR:
sphf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
DM480_16385
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
DM480_16385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF4835
Motif
Other DBs
NCBI-ProteinID:
AXJ97399
UniProt:
A0A345WUP7
LinkDB
All DBs
Position
p01:complement(105927..107303)
Genome browser
AA seq
458 aa
AA seq
DB search
MSLRSIAIIGAAVATAHAASAQNIGPSSPAVLTYARAQEQLLDRSDAIAASDANVRSKEA
QEGATRTLRRPDVDLEAQLLDYQKTLYLPLGSLAPVAEGFGIPDPLRFQVRRQSTRPIAS
TTLPIYTGGQISGTQAGARAQVAQAQADRAITANDQLVQLVRAYFGQQLAERALGVRRDV
LDGLDRHVADAVKLEEARFISRAQRLQAEVARDDARAEYEKAIADLQTANAALAGLLREP
AGVRPSTPLFVISRPLPPLDTFKAAALASHPQLERLSSLEDQAKAGVLIQQAKQRPTVYG
FGQYNFDRRDTLLTDPDWAVGVGLRYKLAGGLGRRQAVDAARATAEQARAGLREGRTQIE
IGVTKAWNDVEAARKRYLLLDTSLASSIENLRLQTLSYREQQATSLDVIDAQLSLGRSRI
QRAQAANEYVQALAQLLNVSGQMDEMAAYVAKADKVIP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcggtctatcgccatcatcggcgccgcggtcgcgacggcgcatgccgcatcg
gcccagaacatcggcccctcaagccccgccgtcctgacatacgcccgtgcgcaggagcag
ctgctggaccgttccgacgcgatcgcggcctcggacgcgaacgtgcgcagcaaggaggcg
caagagggagccacgcgcacattgcgcaggccggacgtcgacctcgaggcgcaactgctg
gactatcagaagacgctctatctgccgctcggttcgctcgcgccggtcgccgagggcttc
ggcatccctgacccgctgcggtttcaagttagaaggcaaagtacgcgccccatcgcttcg
acgaccctcccgatctacaccggagggcagatttcggggacgcaggctggtgcgcgggca
caggtggcgcaggcgcaggccgaccgggccatcaccgccaacgatcagctcgtgcaactg
gtgcgggcctatttcggccagcagctagccgagcgagcgctgggcgtgcgccgcgacgtg
ctcgatgggctcgaccgtcacgtcgcagacgccgtcaagctcgaggaagcgcgcttcatc
agccgggcgcaacgccttcaggcagaggtggcacgcgacgacgcacgggcggaatatgag
aaggcgatcgctgacctccagacggcgaatgcggcgcttgcggggctgctgcgcgaaccc
gcaggagtgaggccgtcaacgccgctcttcgtcatctcgcgtccactgccgccgctcgac
acgttcaaggccgcggccctagcctcacatcctcaactcgagcggctgtcgtcgctggag
gaccaggcgaaggccggcgtcctgatccagcaggcgaagcagcgcccgaccgtctacggc
ttcggccagtataatttcgaccggcgcgacaccctcctcacggacccggattgggcagtg
ggtgttggcttgcgctataagctcgccgggggtcttgggcgccgacaggcggtcgatgcg
gcacgggcgacggcggaacaggcgcgcgccggtctgcgcgaaggccgcacgcagatcgag
atcggtgtgacgaaggcgtggaacgacgtcgaggcggcgcgaaagcggtatctgcttctc
gatacctccctcgcttcatctatcgagaatctgcggcttcagaccctatcctatcgggaa
cagcaggcgacatcgctggacgtcatcgacgcgcagctttcgctggggcgatcgcgcatc
cagcgcgcgcaggcggccaacgaatatgtacaggcacttgcccagcttctgaacgtcagc
gggcaaatggatgagatggccgcatacgtcgccaaagccgacaaggtaattccatga
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