Sphingobium sp. RAC03: BSY17_1962
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Entry
BSY17_1962 CDS
T04461
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr01501
beta-Lactam resistance
sphr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSY17_1962
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BSY17_1962
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphr02000
]
BSY17_1962
01504 Antimicrobial resistance genes [BR:
sphr01504
]
BSY17_1962
Transporters [BR:
sphr02000
]
Other transporters
Pores ion channels [TC:
1
]
BSY17_1962
Antimicrobial resistance genes [BR:
sphr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BSY17_1962
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BSY17_1962
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BSY17_1962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Nro1_C
Motif
Other DBs
NCBI-ProteinID:
AOF97375
UniProt:
A0A1B3MW99
LinkDB
All DBs
Position
2004357..2005871
Genome browser
AA seq
504 aa
AA seq
DB search
MSVSRLSPPVRPLVLATMMSLLAGCAAVPDLGTKPEIRAADTIAAQQSLAAPQAAWPATD
WWRAYGDPQLTALIEEGLRNAPDMAIAAARFRQAQALAQQSGAALLPSANLDASAAATKQ
SYNMGMPKEFVPQGWLGTGRLALDLGLDLDLWGKNRAALAAATSQARAAKLDAQQAQLAL
TTGVADAYADLARLYDEADIQERTLAIRMASQKLVADRRQNGLETRGSVRQADATVASAR
AQLAGARMAIALRQHQIVALIGAGPDRGAAITRPTPGALAPLGLPADVTTNLVARRPDIA
AALAGTEAAAKRIKVARADFFPAVRLSALIGLQSLGYNTVFANGGAIGSAQPFTNNLFQK
DSIFGNAGPAVSLPIFHGGALQGQYRGARATYDEAVASYDKAVLTAYQEVADAVTSRRTL
DARLVDARAAVAASQDAYGIAKKRYDGGLSTYLDVLNVEDQLLAAQRTVSGLEASAFSLD
IALIRALGGGFAPDAALSKDAPHG
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgagtcgcctttccccgcccgttcgtccgctggtcctggcgacgatgatgtcg
ttgctggcggggtgcgcggcggtccctgaccttggcaccaagcccgaaattcgcgcggcg
gacacgatcgccgcgcagcagagcctggccgcaccgcaggcggcatggcccgctacggac
tggtggcgcgcctatggtgatccgcaactcaccgcactgatcgaggaaggcttgcgcaac
gcgcccgacatggcgatcgccgccgcgcgtttccgccaggcacaggcgctggcgcaacag
tccggcgcggcattgctgccttccgccaatctcgacgccagcgcggccgccaccaagcaa
agctataatatgggcatgcccaaggagttcgtgccgcagggctggctcggaaccggacgg
ctggcgctggacctggggcttgacctcgacctgtggggcaagaaccgcgcggcgctggcg
gcggctacgtcgcaggcgcgcgcggcaaaactcgacgcgcagcaggcgcaattggcgctg
accacgggcgttgccgacgcctatgccgaccttgcccggctctatgacgaggcggacatt
caggagcgcacgctcgccatccgcatggccagccagaagctggttgcggatcggcggcaa
aatgggctggaaacgcgcggcagcgtgcggcaggccgatgccacggtcgcgtccgcgcgc
gcgcaactggccggtgcgcgcatggcgatcgcactgcgccagcatcagattgtggcactg
atcggcgcggggccggaccggggagcggcgattacccggccaacgcccggcgcactggca
ccacttgggcttcccgccgacgtcaccaccaatctggtcgcgcgccgtcccgacattgcg
gcggcccttgccggcaccgaggcggcggccaagcggatcaaggtcgcgcgcgccgatttc
ttccccgccgtgcggctgagcgccctgatcggcctgcaatcgttgggctataataccgtc
tttgcgaatggcggcgcgatcggatcggcccagcccttcaccaataatctgttccagaag
gactcgatcttcggcaatgccgggccggcggtcagcctgccgatctttcacggtggcgcg
ctgcagggccagtatcgcggcgcgcgcgcgacttatgacgaggcggtggcgagctatgac
aaggccgtgctgacggcctatcaggaggtggcggacgccgtcaccagccgccgcacgctg
gacgcgcgtctggtcgatgcccgtgcggcagtggccgcgtcgcaggacgcctatggcatt
gccaaaaaacgctatgatggcggcctgtccacctatctggatgtgctgaatgtcgaggat
caactcctcgccgcgcagcgtaccgtttccgggctggaggcaagcgccttttcgctcgat
attgccctgatccgcgcgctgggtggtggtttcgcccctgacgccgccctgtccaaggac
gcaccccatggctga
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