Sphingobium sp. RAC03: BSY17_57
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Entry
BSY17_57 CDS
T04461
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr01501
beta-Lactam resistance
sphr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BSY17_57
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BSY17_57
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphr02000
]
BSY17_57
01504 Antimicrobial resistance genes [BR:
sphr01504
]
BSY17_57
Transporters [BR:
sphr02000
]
Other transporters
Pores ion channels [TC:
1
]
BSY17_57
Antimicrobial resistance genes [BR:
sphr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BSY17_57
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
BSY17_57
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
BSY17_57
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Queuosine_synth
Motif
Other DBs
NCBI-ProteinID:
AOF96225
LinkDB
All DBs
Position
62440..63870
Genome browser
AA seq
476 aa
AA seq
DB search
MLSCVSRRVSGTLVLCILPTLGACASVPNLGPTPSLTSQSALTTDPRVARLNAAWPTDRW
WTDYGDAQLDRLIEEGTAGSPTLAAAQARLRRAQGLAQQAGASLMPSVSGTASLSETKQS
YNNGVPAAFAPQGWNEAASANLSFSYEFDFFGRNRASLVSATSETFAARAEVEQSRLTLT
TSIANYYAQLLGQWREIDLAVETVRIRQSSADLVTRRRSQGLETVAAVGQANSALESAQA
NEESLREQARLIEYQIAALLGAGPGRAVDIRRPTEPMLHAVGLPAGASIDLIARRPDIVA
ALRRVEARAADVRVARAGFYPSVSLSALIGQQVLGLGNFFNAGSRYGSAGPSISLPIFQG
GRLSGEYRTAQAQFDEAVATYNDTLVNALQNVASTVTSQQSLTLQLGHATRAQAEAERAY
RAANDRYRGGLSNYIDVLTAENTLISARRSVSQLQTRAFTLDVALVRALGGGFHTA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcttagttgtgtatcacgtcgagtatcaggtactctggtgctgtgcattcttcccacg
ctcggggcttgtgcctcggttcccaatctcggacctacgccatctcttacatcgcagagc
gcattaacgaccgatcccagggtggcgcggctgaacgcggcatggccaactgatcgatgg
tggaccgattatggcgacgcacagctcgaccggctcattgaggaaggcaccgccggatcg
ccaacgctagcggcggcacaggcgcggcttcgtcgcgcccaaggactcgcccagcaggcg
ggcgccagcctgatgccttcggtcagcggcaccgcctcgctttcggagaccaagcaaagc
tacaataacggtgtcccagcggccttcgcccctcaaggctggaacgaggcagcgtccgcc
aatctaagcttttcatacgagttcgacttctttggccgcaatcgcgcgtcgctcgtatcc
gcaacgtccgaaaccttcgccgctcgcgcggaggtggagcagtcgcggctgacgctgacc
acatcgatcgccaactattacgcccagcttcttggtcaatggcgcgaaatcgacttggcg
gtggagacggtgcgcatccgacagagttccgctgacctcgtgacgcggcgtcgctctcag
ggtttggaaacggtcgcggcggttgggcaggcgaacagtgcattggagtcggcgcaagcc
aacgaagaaagtcttcgcgaacaggcacgattgatcgaatatcagatcgcagcgctgctc
ggcgccggaccgggccgggccgttgatatacggcgccccacggagcccatgcttcacgcg
gtcggcctgccggccggcgcgtcgatcgaccttattgcccggcgcccggacattgtagcc
gcgttgcgccgcgtcgaggcgcgcgcggccgatgtgcgtgtagcgcgggcgggtttctat
cccagcgtcagcctgtccgcgctgatcggccagcaggtactcggcctgggtaatttcttc
aacgccggctctcgctacggctcggccggaccgtccatctcgctgccgatctttcagggg
ggccgcttgtccggcgagtatcgaaccgctcaagcgcaatttgatgaagcggtcgcgacc
tacaacgatacgttggtcaacgcgttgcaaaacgtcgcctcgacggtcacgagccagcag
tcgctgacgcttcagcttggtcatgccacccgcgcgcaggccgaagcggagcgcgcctat
cgagccgcgaacgatcgctatcgcggtggcttgtccaactacatcgacgtgctgaccgca
gaaaacaccttgatctccgcgcggcgcagcgtttcgcagcttcaaacccgtgccttcacc
ctcgacgtcgcgctggtgcgcgcgctcggcggcggtttccacactgcctga
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