Sphingobium sp. TKS: K426_23444
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Entry
K426_23444 CDS
T04965
Name
(GenBank) NodT family RND efflux system outer membrane lipoprotein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
spht
Sphingobium sp. TKS
Pathway
spht01501
beta-Lactam resistance
spht02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
K426_23444
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K426_23444
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spht02000
]
K426_23444
01504 Antimicrobial resistance genes [BR:
spht01504
]
K426_23444
Transporters [BR:
spht02000
]
Other transporters
Pores ion channels [TC:
1
]
K426_23444
Antimicrobial resistance genes [BR:
spht01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K426_23444
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
K426_23444
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
K426_23444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AMK25592
LinkDB
All DBs
Position
2:558511..559962
Genome browser
AA seq
483 aa
AA seq
DB search
MKARIRFPLLSLPLALASCNLAPTFQRPATTLPSHYPLLPADDPSPGRLLGWHEFFADAQ
LRFLIATALEHNRDLSQAVARVEQARARFRIRDAARVPELDLSASATHARPSAAGLAAGV
PGGAGETPASGSASYDLLSIGVSMPSFELDFWGRLRNLSDAARARYLATAASERAFRLAL
IGQVAETYYAIRAGEQRIILAQHAVVSRREGERIARMRLDAGLTSSADFDQATSLATQAE
AELAEQQRVVEQTRNLLDLLIGGAVGGPLPPPLPITQSAQFTPLRAGIPSTLLMDRPDII
ASEMQLRAANADVGAARAAFLPTFSLTGAQGWASTALDDLLTSHSRTATLGIAIDIPFLD
WGRRKAELAVARAQVREAGAAYQAAAQQAFREVADGLAGRLWYARQIDAQRRTVDAQRRL
ARTARLRYANGIAIYLEVLDAERNLFTGEQQLLALQLAELRNGVSLYIALGGGRVETGQT
TRP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctaggatacgcttcccactgctctcgctgccgcttgcgctggcaagctgcaat
ctcgcccccacctttcagcggccggcgacgaccctcccgtcccattatccgctcttgcct
gcggacgacccatcgccgggcaggttgctgggctggcatgagttcttcgccgatgcacag
ttgcgctttctgatcgccacggcactcgagcataatcgcgatctttcccaggcggtcgcg
cgggtcgagcaggcgcgggcccgatttcgcattcgcgacgcggcccgcgttcccgaactg
gatttgagcgcaagcgcaacgcatgcccgtccgtccgcagcggggctggcggcgggcgtg
ccgggcggcgccggggaaacgcccgcctccggttcggccagctacgaccttttgagcatc
ggtgtctcgatgccctcgttcgagctcgatttctggggacggcttcgcaatctgagcgac
gctgcgcgagcgcgctatctcgccacggctgcctccgaacgtgccttccgcttggcgctt
atcggccaggttgccgagacctattacgcgattcgcgcgggtgaacagaggatcatcctg
gcccagcatgccgtcgtcagccggcgcgagggagagcgcatcgcccgcatgcggcttgac
gccggcctcacatcgagcgccgatttcgaccaggcgacatcgctcgcgacgcaagccgaa
gccgaactcgccgaacagcagcgcgtcgtggaacagacgcgaaacctgctcgacctgctg
atcggcggggcagtcggaggccctctcccgccgccgctgccgataacgcaaagcgcgcaa
ttcacccccctcagggccgggatcccttcaacgctgctgatggatcgccccgatatcatc
gcttcggaaatgcaattgagggctgccaatgcggatgttggagcggccagggcggctttc
ctgccgacgttctcgctcaccggcgcgcagggatgggcgtcgacggcgctggacgacctg
ctgacttcccattcgcgcaccgccacgctgggcatcgcgatcgatataccctttctggac
tgggggcgccgcaaggcagagcttgccgttgcgagggcacaggttcgcgaggcgggcgcg
gcctatcaggcagcggcgcagcaggcctttcgcgaggtggcggacggcctcgccggacgg
ctatggtacgcccgacagatcgatgcgcaaaggcggacggtggacgcccaacgcaggctc
gcgaggacggcacggctgcgttatgccaacggcattgccatctatctcgaggtcctggac
gccgagcgcaacctgttcaccggcgagcagcaactgcttgccctgcaactggcggagctt
cgcaacggcgtgtcgctgtacatcgctctgggaggcgggcgggtcgagaccggccagacc
actcgcccctga
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