Uncultured Sphingopyxis sp. UC10: SPPYR_3018
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Entry
SPPYR_3018 CDS
T05531
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu01501
beta-Lactam resistance
sphu02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPPYR_3018
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SPPYR_3018
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphu02000
]
SPPYR_3018
01504 Antimicrobial resistance genes [BR:
sphu01504
]
SPPYR_3018
Transporters [BR:
sphu02000
]
Other transporters
Pores ion channels [TC:
1
]
SPPYR_3018
Antimicrobial resistance genes [BR:
sphu01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SPPYR_3018
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SPPYR_3018
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SPPYR_3018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
SBV34138
UniProt:
A0A1Y5PVV9
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All DBs
Position
SPPYR:3169240..3170643
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AA seq
467 aa
AA seq
DB search
MRIAPFAIAVLAGTLTACAGPNVALTEVAPVAPPAAWRTEAGGAAPLQDGWWQSFGDPAL
AALVEKALAHNSDVGIAAARVREARANVALARAQTLPAIDATLGAGRSRSVNAFGQPAEQ
SFAQPQVQIAYEVDLFGRLADQRSAARDAFFASEAARDAVRLSVAAAVANNYVVLRSLDA
RLAVARETVRARSESLRITKSRVGSGYSPKLELQQAQAEYDATAQIVPQLELGIARTEDA
LSLLVGETPRAIDRGVPLDRLTVPAIPGGLPSELLRRRPDVAQAEYQLAASDKNLAAARK
RFLPQVRLTSAAGAAFSTLLGDPITIWSVGGSILAPIFQGGRLTAQADAAGAQRDQAAFA
YRRAALTAFREVEDALAAVRRIDEQLLFAQSQRDALAEGLRLATNRYREGYSPYLEQLDA
QRGLLGAELSLVQLRADALTARVQLFQAMGGGWAPCGAPDAPCAPEI
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgaggatagcgcccttcgcgatcgccgtgctggcaggcacgctgaccgcctgcgccggg
ccgaatgtcgcgctcaccgaggtcgcgcccgtcgcgccgcccgccgcgtggcgaaccgaa
gcgggcggcgccgcgccgctgcaagacggctggtggcaatcgttcggcgacccggcgctg
gcggcgctggtggaaaaggcgctcgcccataacagcgacgtcggcatcgccgcggcgcgc
gtgcgcgaggcgcgcgccaatgtcgcgctggcgcgggcgcagaccctgcccgcgatcgac
gcgacgctcggcgccggacggtcgcgatcggtgaacgccttcggccagccggccgaacag
agcttcgcccagccgcaagtccagatcgcctatgaggtcgacctgttcggccgcctcgcc
gaccagcgatcggccgcgcgcgacgcctttttcgcgagcgaagcggcgcgcgacgcggtg
cggctgtcggtcgctgcggcggtggcgaacaattatgtcgtgctgcgcagcctcgacgcg
cggctcgcggtcgcgcgcgaaacggtgcgcgcgcgttccgaatcgttgcggatcacgaaa
tcgcgcgtcggatcgggctattcgcccaagctcgaacttcaacaggcgcaggccgaatat
gacgcgaccgcgcagatcgtcccgcagctcgagctcggaatcgcgcgcaccgaagatgcg
ttgagcctgctcgtcggtgagacgccgcgcgcgatcgatcgcggtgttcccctcgatcgc
ctgaccgtgcccgcgatccccggcggcctgccctccgaactgttgcgccgccggcccgat
gtcgcgcaggccgaatatcagctcgcggcgtcggacaagaatctcgcggcagcgcgcaaa
cgtttcctcccgcaagtgcgtctcacctcggcggcgggtgcggccttttcgacgctgctc
ggcgatccgatcaccatctggtcggtcggcggcagcatcctcgcacccatcttccagggt
ggccgcctgaccgcgcaggccgatgcggcaggggcgcagcgggaccaggcggctttcgcc
tatcgccgcgccgcgctcaccgcgttccgcgaggtcgaagatgcgctcgcggcggtcagg
cggatcgacgagcagctattgttcgcgcagtcgcagcgcgacgcgctcgccgaagggctg
cgcctcgcgaccaaccgctaccgcgaaggctattcgccctatctcgaacagctcgacgcg
cagcgcgggctgctcggcgccgaattgtcgctggtccagctgcgcgccgacgcgctcacc
gcacgcgtccagctgtttcaggcgatgggcggcgggtgggcgccctgcggagcgcccgac
gcgccctgcgcccccgaaatctag
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