KEGG   PATHWAY: sphv02010
Entry
sphv02010                   Pathway                                
Name
ABC transporters - Streptomyces phaeolivaceus
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
sphv02010  ABC transporters
sphv02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Streptomyces phaeolivaceus [GN:sphv]
Gene
F9278_00595  [KO:K01998]
F9278_00600  [KO:K01997]
F9278_00605  [KO:K01999]
F9278_00610  [KO:K01995 K01996]
F9278_01080  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
F9278_01085  modB; molybdate ABC transporter permease subunit [KO:K02018]
F9278_01090  [KO:K02017] [EC:7.3.2.5]
F9278_01425  [KO:K02012]
F9278_01430  [KO:K02010] [EC:7.2.2.7]
F9278_01435  [KO:K02011]
F9278_01965  [KO:K23188]
F9278_01970  [KO:K23187]
F9278_01975  [KO:K23186]
F9278_01980  [KO:K25286]
F9278_02425  urtE; urea ABC transporter ATP-binding subunit UrtE [KO:K11963]
F9278_02430  urtD; urea ABC transporter ATP-binding protein UrtD [KO:K11962]
F9278_02435  urtC; urea ABC transporter permease subunit UrtC [KO:K11961]
F9278_02440  urtB; urea ABC transporter permease subunit UrtB [KO:K11960]
F9278_02445  urtA; urea ABC transporter substrate-binding protein [KO:K11959]
F9278_02455  [KO:K11959]
F9278_02480  [KO:K02007]
F9278_02485  [KO:K02009]
F9278_02490  cbiQ; cobalt ECF transporter T component CbiQ [KO:K02008]
F9278_02495  [KO:K02006]
F9278_02530  [KO:K10439]
F9278_02660  [KO:K10439]
F9278_03040  [KO:K15554]
F9278_03045  [KO:K15555] [EC:7.6.2.14]
F9278_03050  [KO:K15553]
F9278_03060  [KO:K15553]
F9278_04040  [KO:K05845]
F9278_04045  [KO:K05846]
F9278_04050  [KO:K05846]
F9278_04055  [KO:K05847] [EC:7.6.2.9]
F9278_04555  [KO:K23228]
F9278_04560  [KO:K23227]
F9278_04565  [KO:K10829] [EC:7.2.2.16]
F9278_04635  [KO:K15554]
F9278_04640  [KO:K15555] [EC:7.6.2.14]
F9278_04645  [KO:K15553]
F9278_05220  [KO:K10439]
F9278_05225  [KO:K10440]
F9278_05230  [KO:K10441] [EC:7.5.2.7]
F9278_05310  [KO:K17244]
F9278_05315  [KO:K17245]
F9278_05320  [KO:K17246]
F9278_07305  [KO:K02073]
F9278_07310  [KO:K02072]
F9278_07315  [KO:K02071]
F9278_07690  [KO:K02002]
F9278_08000  [KO:K23535]
F9278_08595  [KO:K01996]
F9278_08770  [KO:K23187]
F9278_08775  [KO:K23186]
F9278_09300  [KO:K17318]
F9278_09305  [KO:K17320]
F9278_09310  [KO:K17319]
F9278_10250  [KO:K01999]
F9278_10255  [KO:K01997]
F9278_10260  [KO:K01998]
F9278_10265  [KO:K01995]
F9278_10270  [KO:K01996]
F9278_11525  [KO:K15772]
F9278_11530  [KO:K15771]
F9278_11535  [KO:K15770]
F9278_11640  [KO:K18232]
F9278_11645  [KO:K18233]
F9278_12245  [KO:K16785]
F9278_12760  yjfF; sugar ABC transporter permease YjfF [KO:K23509]
F9278_12765  [KO:K23509]
F9278_12770  [KO:K10820] [EC:7.5.2.9]
F9278_12775  [KO:K23508]
F9278_12805  [KO:K10546]
F9278_12810  [KO:K10548] [EC:7.5.2.-]
F9278_12815  [KO:K10547]
F9278_13330  [KO:K18887]
F9278_13335  [KO:K18888]
F9278_13605  [KO:K09815]
F9278_13610  [KO:K09817] [EC:7.2.2.20]
F9278_13615  [KO:K09816]
F9278_14345  [KO:K03523]
F9278_14355  [KO:K15553]
F9278_14360  [KO:K15554]
F9278_14365  [KO:K15555] [EC:7.6.2.14]
F9278_16305  [KO:K10441] [EC:7.5.2.7]
F9278_16310  [KO:K10439 K10440]
F9278_16320  rbsD; D-ribose pyranase [KO:K06726] [EC:5.4.99.62]
F9278_16360  [KO:K02012]
F9278_16365  [KO:K02011]
F9278_16370  [KO:K02010] [EC:7.2.2.7]
F9278_16740  [KO:K25287]
F9278_16860  [KO:K10240]
F9278_16865  [KO:K10241]
F9278_16870  [KO:K10242]
F9278_17555  [KO:K05846]
F9278_17560  [KO:K05847] [EC:7.6.2.9]
F9278_17565  [KO:K05846]
F9278_17570  [KO:K05845]
F9278_17730  [KO:K17331]
F9278_17735  [KO:K17330]
F9278_17740  [KO:K17329]
F9278_18180  [KO:K09811]
F9278_18185  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
F9278_18220  [KO:K10232]
F9278_18225  [KO:K10233]
F9278_18230  [KO:K10234]
F9278_18325  [KO:K09692]
F9278_18330  [KO:K09693] [EC:7.5.2.4]
F9278_19430  [KO:K02006]
F9278_19435  cbiQ; cobalt ECF transporter T component CbiQ [KO:K02008]
F9278_19440  [KO:K02007]
F9278_20835  [KO:K01999]
F9278_21570  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
F9278_22145  [KO:K02036] [EC:7.3.2.1]
F9278_22150  pstA; phosphate ABC transporter permease PstA [KO:K02038]
F9278_22155  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
F9278_22160  pstS; phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
F9278_23780  cydD; thiol reductant ABC exporter subunit CydD [KO:K16014]
F9278_25580  [KO:K10544]
F9278_25585  [KO:K10545] [EC:7.5.2.10]
F9278_25590  [KO:K10543]
F9278_25745  [KO:K10546]
F9278_26430  [KO:K10543]
F9278_28850  [KO:K10232]
F9278_30100  [KO:K15555] [EC:7.6.2.14]
F9278_30110  [KO:K15554]
F9278_30115  [KO:K15553]
F9278_30925  [KO:K17328]
F9278_30930  [KO:K17327]
F9278_30935  [KO:K17326]
F9278_31635  [KO:K07335]
F9278_31640  [KO:K07335]
F9278_31645  [KO:K23537]
F9278_31650  [KO:K23535]
F9278_31655  [KO:K23536]
F9278_32670  [KO:K15580]
F9278_32675  [KO:K15581]
F9278_32680  [KO:K15582]
F9278_32685  [KO:K15583]
F9278_32690  [KO:K10823]
F9278_33295  [KO:K17329]
F9278_33300  [KO:K17330]
F9278_33305  [KO:K17331]
F9278_35510  [KO:K02064]
F9278_35515  [KO:K02063]
F9278_35520  [KO:K02062] [EC:7.6.2.15]
F9278_35570  [KO:K10439]
F9278_35575  [KO:K10441] [EC:7.5.2.7]
F9278_35580  [KO:K10440]
F9278_35585  [KO:K10440]
F9278_35660  [KO:K11069]
F9278_35665  [KO:K11072] [EC:7.6.2.11]
F9278_35670  [KO:K11071]
F9278_35675  [KO:K11070]
F9278_35725  [KO:K17318]
F9278_35730  [KO:K17319]
F9278_35735  [KO:K17320]
F9278_35790  [KO:K10119]
F9278_35815  [KO:K05846]
F9278_36470  [KO:K10007]
F9278_36475  [KO:K10006]
F9278_36480  [KO:K10005]
F9278_36485  [KO:K10008] [EC:7.4.2.1]
F9278_37490  ngcE; carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein [KO:K10200]
F9278_37495  [KO:K10201]
F9278_37500  [KO:K10202]
F9278_37510  [KO:K10543]
F9278_37515  [KO:K10545] [EC:7.5.2.10]
F9278_37520  [KO:K10544]
F9278_37625  [KO:K10117]
F9278_37630  [KO:K10118]
F9278_37635  [KO:K10119]
F9278_38215  [KO:K15554]
F9278_38220  [KO:K15555] [EC:7.6.2.14]
F9278_38225  [KO:K15553]
F9278_39255  [KO:K10008] [EC:7.4.2.1]
F9278_39880  [KO:K10441] [EC:7.5.2.7]
F9278_39885  [KO:K10440]
F9278_39890  [KO:K10439]
F9278_40275  [KO:K10242]
F9278_40280  [KO:K10241]
F9278_40285  [KO:K10240]
F9278_40775  [KO:K09692]
F9278_40780  [KO:K09693] [EC:7.5.2.4]
F9278_41585  [KO:K01999]
F9278_41590  [KO:K01997]
F9278_41595  [KO:K01995 K01998]
F9278_41600  [KO:K01996]
F9278_41780  [KO:K06726] [EC:5.4.99.62]
F9278_42245  [KO:K11959]
F9278_42255  [KO:K10117]
F9278_42260  [KO:K10118]
F9278_42265  [KO:K10119]
F9278_43030  [KO:K10562] [EC:7.5.2.-]
F9278_43035  [KO:K10560]
F9278_43040  [KO:K10561]
F9278_43045  rhaS; rhamnose ABC transporter substrate-binding protein [KO:K10559]
F9278_43685  [KO:K17241]
F9278_43690  [KO:K17242]
F9278_43695  [KO:K17243]
F9278_44035  [KO:K10202]
F9278_44040  [KO:K10201]
F9278_44045  [KO:K10200]
F9278_44445  [KO:K02000] [EC:7.6.2.9]
F9278_44450  [KO:K02001]
F9278_44455  [KO:K02002]
F9278_45600  [KO:K01996]
F9278_45605  [KO:K01995]
F9278_45610  [KO:K01997]
F9278_45615  [KO:K01998]
F9278_45865  [KO:K10552]
F9278_45870  [KO:K10553]
F9278_45875  [KO:K10554]
F9278_45945  [KO:K25286]
F9278_45950  [KO:K23186]
F9278_45955  [KO:K23187]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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