Spirosoma sp. KCTC 42546: EXU85_10290
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Entry
EXU85_10290 CDS
T06164
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik01503
Cationic antimicrobial peptide (CAMP) resistance
spik02020
Two-component system
spik03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EXU85_10290
09132 Signal transduction
02020 Two-component system
EXU85_10290
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_10290
01503 Cationic antimicrobial peptide (CAMP) resistance
EXU85_10290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_10290
02044 Secretion system [BR:
spik02044
]
EXU85_10290
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_10290
Transporters [BR:
spik02000
]
Other transporters
Pores ion channels [TC:
1
]
EXU85_10290
Secretion system [BR:
spik02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EXU85_10290
RTX toxin transporter
EXU85_10290
Multiple protein transporter
EXU85_10290
RaxAB-RaxC type I secretion system protein
EXU85_10290
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
EXU85_10290
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
EXU85_10290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QDK78974
UniProt:
A0A514ZWQ0
LinkDB
All DBs
Position
2547663..2549177
Genome browser
AA seq
504 aa
AA seq
DB search
MCMQRKLFLGIGIVGCLLSVSPSGLRAQNAPGTVSPGVGTAKTDTLPVLSLPQCIDIALK
NNITVRQGQLQVQNSALLLKQSKLNQLPTVNGFASQGFSSGRNINPSTNQFVDVGVRSNN
FQLSGSVPIFQGYQLKNLIRQNQVIVKATEKELDATENNVILNVIQQYLGVLTGAEQLAV
AKRQAETSQLQVERTQKLVNAGSAPEANLFEIKATLANDELAIVNAQNTVDLAKLALLQA
MNLPGGQSFEIEYIKLPDPRIEGYSATALQVYETALSSQPQIQAADLRTESARIAVDVAK
AGLYPRLSLSGNLSSLYSSVGLSRFIADGSTTENRTDANVLIGGTIQPVTIITTQPGGSF
QTYGFFEQLSNTLNRGVSLNLNIPIFTNRQFRTNVTSAIIQQQNTQLTADNTRLLLRQQI
ETAYTNLLAASNRYRATEASVSSLDRAFKAAESRFNAGAINAVDYSLAKLRLDNARAQLV
QAKYDYVFRTKILDFYQNKPLSFN
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtgtatgcagcgtaagctttttttaggaatcggaatcgtgggatgtttgctgtccgta
agcccgtcaggcttgcgcgcacaaaacgcaccgggaaccgtgtcgccaggggtggggaca
gccaaaacggacaccctccccgtgctgagtttaccgcaatgtattgatattgccctgaag
aataacattaccgttcggcaggggcaattgcaggtacagaatagtgcattgctattaaag
cagtcaaagcttaatcagttaccaaccgttaacggatttgcttcgcaaggtttcagttcc
ggtcgaaatatcaacccgagtaccaaccagttcgttgatgtaggggtacgatctaataat
tttcagctttctggctcagtacccatttttcagggctatcaattgaagaatctgattcgt
cagaaccaggttattgttaaggccacggaaaaagaactggatgcgactgaaaataacgta
attcttaatgtcatacagcaatatctgggcgtattaaccggtgctgagcagttagccgtt
gctaaacggcaggccgagacctcgcaacttcaggtagagcgtacgcagaaattagtgaat
gcgggttctgctccagaagcaaacctgtttgaaattaaagcgacgctggcgaacgatgaa
ttagccattgtgaatgctcagaatacggtcgatctggcaaaacttgctttattgcaggct
atgaacctaccgggcggccagtcttttgagattgaatatattaagctgccagaccctcgt
attgaagggtattcggcaaccgcattgcaggtgtatgaaacagccttaagttcacagccg
caaattcaggccgctgatcttcgtactgaaagtgcgcgtatagcggttgatgtagccaag
gcgggcttatatccacgccttagtttaagtggtaatttatcgtcgctttattcgagtgtt
gggctctcgcggtttattgctgatgggtcaacaacggagaatagaacagacgctaacgtt
ctcatcggcggtactatacaaccagttaccatcatcactacgcagccaggcggttcattt
caaacgtatggtttttttgagcaattaagcaataccctcaaccgtggggtgtcgcttaac
ctcaatattcctatttttacaaaccggcagttccgtaccaacgtaacaagtgctattatt
caacagcagaatacacaacttacggctgataatactcggttgctgctacgccaacagatc
gaaacggcatacacaaatctgctggcggcttccaaccgctatcgagccactgaagcatcg
gtttcatctttagatcgggcatttaaggcagctgaaagccgtttcaatgcaggggcgatc
aacgctgttgattacagccttgctaaactccggctcgacaatgctcgtgctcaattggta
caagcgaaatacgattatgtgttcagaaccaagattttagacttttaccaaaataaaccg
cttagttttaattaa
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