Spirosoma sp. KCTC 42546: EXU85_16015
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Entry
EXU85_16015 CDS
T06164
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EXU85_16015
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_16015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_16015
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_16015
Transporters [BR:
spik02000
]
Other transporters
Pores ion channels [TC:
1
]
EXU85_16015
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EXU85_16015
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
EXU85_16015
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
EXU85_16015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF4320
Motif
Other DBs
NCBI-ProteinID:
QDK80031
UniProt:
A0A514ZZJ5
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All DBs
Position
3946287..3947759
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AA seq
490 aa
AA seq
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MVPFFRNLNRNPFSFLVSLIVAGSLGSCRIQHNPESVPAMSVPKVYVGRADGRADSVSIG
DWSHRDLFADPNLVALIDTAMARNPNMKIAFQRIEMAQANYGISQGALRPRVDAVATAGV
ERYGRYTLNGVGNYDTNLSGNVSGSSRIPNPTPDYFVGLRSSWEVDIWGKLRNRRRAAYT
RVIASQEGQNLVATVLTADVARLYYSLLALDAELEIIVENVELQQKALELVEVQKAAGRV
TELAVQQFRAQLLNTRGLEGRVKQEVVETENQLNVLLGRYPQTVARGASIEKQSLPATVS
AGLPAQLVYRRPDIRQAERELEAFHIDVAVARAEFLPSLNLAPYLGFNAFRPNVLLNPQS
LALGILGGLAAPVINRQQLKGNLAITTAQSREAYYAYQRAILTGVSEVVSNLKGLENYRN
VAGFQQEEVAVLRQAATTSNELFANGYATYLEVITAQRNVLEAELALITTKRAQFLELVS
LYRALGGRAK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggtgccatttttcaggaatcttaaccgtaaccccttctcttttttagtgagtttgatc
gttgccggtagtttaggtagttgtcggattcagcataacccggaatctgtaccggcaatg
tcggtgcccaaggtttacgttggacgtgcagatgggcgagcggattcggttagtattggg
gattggtcacatagggacttatttgccgatccgaatctggtggcacttatcgacaccgcc
atggctcgcaatcctaatatgaagattgcgtttcaacgtatcgagatggctcaggcaaac
tacggaattagccagggcgcattgcgcccccgtgtcgatgctgtggctacggcaggggta
gagcggtatggtcgctacacactcaatggcgtgggtaattacgacacgaatctgtcgggt
aacgtttccggatcgagccgaatcccgaacccaacccccgattactttgtggggctgcgt
agctcatgggaggttgatatttgggggaagctccgtaaccgtcgacgagcggcttataca
cgcgtaatagcttcacaggaagggcaaaatctggtggcaacggtacttactgccgatgtg
gcccgattatattactcattactggccttggatgcggagttggaaatcattgtcgagaac
gttgagctacagcagaaagcgcttgagctagtcgaagttcagaaagctgcaggacgggta
acagaacttgctgttcagcaatttcgtgctcaacttctcaatacgcggggactggaaggc
cgggtaaagcaggaggtcgtagaaacggaaaaccaactgaacgtgctgctgggccgctat
ccacagacagtagcgcgtggggcatcgatcgaaaagcagtcattgcctgcaactgtgtcg
gcgggtttgcctgcgcagttagtgtatcgtcgccccgatattcgtcaggcagagcgtgag
ctggaagcctttcacatagacgtagccgtggcacgagctgaatttttaccctcactcaac
ctggctccgtatttaggtttcaatgcctttcggcccaatgtactgctaaatccacagtcg
ctggctttaggcattctgggtggattagccgctccagtcatcaaccgacaacagctaaag
gggaatctagccattacgacggcccagagccgtgaagcgtattatgcctaccaacgggca
attttaaccggtgtttcagaagtagtgagcaatctgaagggtctggaaaactaccggaat
gtggctggttttcagcaagaggaggtagctgtacttcggcaggcggctaccacatcgaac
gaattatttgctaatgggtatgcaacctatctggaggtcataacggcccagcgaaatgtg
ctcgaagcggagttagcattgattaccacaaaacgggcgcagtttctggaattagttagt
ttgtacagagcgttgggcggaagagcaaaatga
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