Spirosoma sp. KCTC 42546: EXU85_17495
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Entry
EXU85_17495 CDS
T06164
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik01503
Cationic antimicrobial peptide (CAMP) resistance
spik02020
Two-component system
spik03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EXU85_17495
09132 Signal transduction
02020 Two-component system
EXU85_17495
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_17495
01503 Cationic antimicrobial peptide (CAMP) resistance
EXU85_17495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_17495
02044 Secretion system [BR:
spik02044
]
EXU85_17495
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_17495
Transporters [BR:
spik02000
]
Other transporters
Pores ion channels [TC:
1
]
EXU85_17495
Secretion system [BR:
spik02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EXU85_17495
RTX toxin transporter
EXU85_17495
Multiple protein transporter
EXU85_17495
RaxAB-RaxC type I secretion system protein
EXU85_17495
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
EXU85_17495
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
EXU85_17495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5496
Motif
Other DBs
NCBI-ProteinID:
QDK80301
UniProt:
A0A515A0C0
LinkDB
All DBs
Position
complement(4287905..4289245)
Genome browser
AA seq
446 aa
AA seq
DB search
MNRTFIGFLFALGWFLSIDAVSQKTTDSLSKQAYLSDCIQYALGHQPVVRQSIIDQDIAE
RTVQSALAAWYPQLSASYNLLHYLKLPVTLIPDATTGEKRPVSLGAQNTSTASLSVTQSI
FNRDVLLASRTADAYREQATQNTVRNKIDVVVNVSKAFYDLILTQRQVDILTQDIARLTR
SLQDATNQYQSGIVDKTDPQRAKIALNNSRAQQKQYRDLVGSKYQVLKQVMGYPPTSQLA
VTYDTLQLAREVTLDTLSLVNPQNRIEYQLLQTQGRLLDANVRYNRWAYLPSVSAFGNYN
LLYQNNAFGQLYSASFPNSVIGLTLALPIFQGGRRIHQTKIAELQVQRLNWDLAALTSAV
DAEYATALANYKGNLANYLALVENQQLAEDVYRIINLQYRSGIKTYLDVTIAEADLRTAR
LNVFNALYQVLISKLDVQRALGVIQF
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaacgtttattggctttcttttcgcgcttgggtggtttttgtcgattgatgca
gtaagtcagaaaacaacagattcgctatcgaaacaagcttatctttccgattgcattcag
tatgcgttgggtcatcagcctgtagtccgtcagtcgattattgaccaggatattgccgaa
cgtactgtgcaaagcgcactggccgcctggtacccccaactaagtgcctcctataacctg
ctccattacctcaaactgcccgttaccctcattcctgatgcgaccacgggtgagaaacgt
cccgtttcgctcggtgcccaaaacacatcgacggcctcactttcggtaacgcaaagtatt
tttaaccgggatgtgttactggccagccgaactgccgacgcctaccgggaacaggctact
cagaacacggtccgaaataaaatcgatgttgtcgtaaatgtcagcaaagcgttctatgat
ctaatcctgacgcaacgtcaggtcgatattctgacccaggatatcgctcgcctgacacgt
agtttacaggacgctaccaatcagtatcagagcggaattgttgataaaaccgatccgcag
cgtgcgaagattgcgcttaataattcccgcgctcagcagaaacaatatagggatctggtt
gggtcaaaataccaggtgctaaaacaggttatggggtacccgccaacaagtcaactggcg
gtaacctatgataccttacaattggccagggaagttaccctggacacactctcgttagta
aatccgcaaaatcggattgaatatcagcttttgcaaacacaggggcgtttactggatgcc
aatgttcgctacaatcgctgggcatatctgccatcggtatcggcctttggtaactacaat
ttattgtatcagaacaatgccttcgggcaactctatagcgcgtcatttcccaactcggta
attggcttaacgcttgcgctacctatttttcagggagggcgacgtattcatcagacaaaa
attgccgagttgcaggttcagcggctgaactgggatctggctgcgctgaccagtgcggtc
gatgccgagtatgccacggccttagcaaactacaaggggaatctggcgaactatctggcg
ctggtcgagaatcagcaactggccgaagatgtgtaccggattatcaacctacagtatcgc
tccggcatcaaaacctatctagacgtaaccatcgccgaagccgatctccgaaccgcacga
cttaatgtattcaatgcactttatcaggtgttgatcagtaagttagatgttcagcgggca
ttgggtgttattcagttttaa
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