Spirosoma sp. KCTC 42546: EXU85_23475
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Entry
EXU85_23475 CDS
T06164
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik01501
beta-Lactam resistance
spik02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EXU85_23475
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EXU85_23475
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spik02000
]
EXU85_23475
01504 Antimicrobial resistance genes [BR:
spik01504
]
EXU85_23475
Transporters [BR:
spik02000
]
Other transporters
Pores ion channels [TC:
1
]
EXU85_23475
Antimicrobial resistance genes [BR:
spik01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
EXU85_23475
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
EXU85_23475
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
EXU85_23475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QDK81408
LinkDB
All DBs
Position
5697717..5699054
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AA seq
445 aa
AA seq
DB search
MPVSFAGHSDSVGIASQNWRTFFADPQLTQLIDTALSSNLDLRIATQRIEMARASFTYSQ
GFLAPQVNAVASAGVDRYGQYTMNGVGNYDTNLSDNIRGSQLTPNPTPDYFLGARSTWEI
DIWGKLHNRKKAAYLRLLASEKGRHAVITALVAEIARHYYALLALDGELEILQKNIDYQQ
NALALVRIQKEAGRVTELAVQQFTAQLLNTRSRQGQVQQQIVENENQMNRLLGRYPQPIA
RGKSLQERELPGQVLTGIPAQMLVRRPDIRQAELDLQAANIDIDVARAEFLPSLNLTAYL
GLNAFRTAVLFNPASIAAGLLGGLSAPILNRRSVKANYQQTVAQSRESLYRYQQAILTGF
SEVSTQLRGVENFRSVAELQAQEVAVLEQAVSTSNDLFRGGYASYLEVITAQRSVLEAEL
ALITTKQSQFLAITDLYRALGGGWE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttcctttgcgggccattcggattcggttgggattgccagccagaactggcgg
acattctttgccgacccgcaactgacgcaactgatcgacactgcgctatccagcaatctg
gatttgcgaattgcaacccaacggatcgaaatggccagagcttcctttacctacagccag
ggttttctggctcctcaggttaacgccgtggcctcggcgggggtggatcggtacggtcag
tacaccatgaatggggtgggtaattacgacacgaacttatcggacaatattcgggggagt
cagctgacgcccaatcccacgcccgactattttctcggcgcccgcagcacgtgggaaatc
gatatctggggaaaactgcacaaccgaaaaaaagcggcttacctgcgattgctggcttcc
gaaaagggccgccatgccgtgataaccgccttagtcgctgaaattgcccggcactattac
gcgctattagccctggatggcgaactggaaatcctgcaaaagaacatcgattaccaacaa
aacgcgctggcattagttcgtattcagaaagaagcgggccgggtaaccgagctagccgtt
cagcaattcacggcccaactgctgaatacccgaagtcggcaggggcaggttcaacagcag
attgtggagaacgagaatcagatgaatcgactactgggtcggtatccccaacccattgcc
cggggcaaatcccttcaggagcgagagttgcccggtcaggtgctgacgggcattccggcg
caaatgctggttcgtcggcctgatattcgtcaggcggaacttgatcttcaggcggccaat
attgacattgacgtagcccgcgccgaatttctgcccagtctgaacctgacggcttatctg
ggactgaacgctttccgaacggcagtactcttcaacccggcgtccatcgctgcgggtttg
ctgggtggtttatcggcccccatcttgaaccggcgttcggtgaaagccaactaccagcag
acggtggcccagagtcgggagtccctgtatcggtatcagcaggctattctgaccggtttc
agcgaagtgtcgacccaattgcggggcgtcgagaattttcgttcggtcgctgagttacag
gcgcaggaggtagccgttttagaacaggccgtttcgacctcgaacgatctgtttcggggt
gggtatgcgtcgtatctggaagtaatcacggctcaacggagcgtgctggaagccgaactg
gccctcatcaccaccaaacagtcgcagtttctggcaataacggatctgtatcgggcgttg
gggggtggttgggaatag
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