Spirosoma sp. SC4-14: WBJ53_20080
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Entry
WBJ53_20080 CDS
T11499
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
spio Spirosoma sp. SC4-14
Pathway
spio01501
beta-Lactam resistance
spio01503
Cationic antimicrobial peptide (CAMP) resistance
spio02020
Two-component system
spio03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
WBJ53_20080
09132 Signal transduction
02020 Two-component system
WBJ53_20080
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WBJ53_20080
01503 Cationic antimicrobial peptide (CAMP) resistance
WBJ53_20080
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spio02000
]
WBJ53_20080
02044 Secretion system [BR:
spio02044
]
WBJ53_20080
01504 Antimicrobial resistance genes [BR:
spio01504
]
WBJ53_20080
Transporters [BR:
spio02000
]
Other transporters
Pores ion channels [TC:
1
]
WBJ53_20080
Secretion system [BR:
spio02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
WBJ53_20080
RTX toxin transporter
WBJ53_20080
Multiple protein transporter
WBJ53_20080
RaxAB-RaxC type I secretion system protein
WBJ53_20080
Antimicrobial resistance genes [BR:
spio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
WBJ53_20080
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
WBJ53_20080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WXC13281
LinkDB
All DBs
Position
complement(4931007..4932350)
Genome browser
AA seq
447 aa
AA seq
DB search
MKKGFIGFLFLVGAWLPGGAFAQKNTDSLAKQAYLDDCIRYALSHQPLIRQSLIDQEVAE
RTVQSSLAAWYPQIAAGYNLVHNLKLPVTLIPNASGERIPTTLGAKNTSTVSFSLNQSVF
NRDLLLASQTADAYRLQAAQTTTNNKINVVVNVSKAFYDLILTQRQVDILSEDIARLQRS
LQDATNQYQSGIVDRTDPQRAKIALNNSVAQRKQYRDLIGSKYQTLKQLMGYPPNAQLTV
AYDTLQLTSEVALDTLQLVNPQNRIEYQLLQTQGRLLNASVRYNRWAYLPTVSAYGTYNL
LYQNNAFSQLYAQTFPNSAIGLAVALPIFQGGRRIQQLKISELQVQRLDWDLAALTSAVD
AEYAQALATYKGNLANYRALLENQQLAEDVYRVINLQYRSGIKTYLDVTIAEADLRTARL
NVFNALYQVLISKLDVQQSLGAIRFAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggttttattggctttctctttttggtaggggcctggctccctggtggagct
tttgcccagaaaaacaccgactctctggcaaaacaagcgtatctggacgattgtatacgg
tatgcactcagtcatcaaccccttattcgtcagtcacttattgatcaggaagtggctgaa
cgtacggttcagagttcgctggctgcctggtatccgcagattgctgccgggtataattta
gtacacaatctgaaactacccgttacacttatcccgaatgcttctggcgaacgtattccg
acaacactgggcgcaaaaaacacgtctacggtttcgttttcactgaatcagagtgtgttt
aaccgggatttgttgctggccagccagacggccgacgcctatcgattacaggcggctcag
accacaacgaacaacaaaattaacgtggtggtgaatgtcagcaaggcattttatgatctg
attctgacccagcgccaggtcgatattctgagtgaggatatcgcacggctgcaacgcagt
ttgcaggatgctaccaatcaataccagagcggcattgttgatcgaactgatccgcagcgg
gctaaaattgcgctgaacaattcagtggcccagcggaagcagtaccgcgatctgattgga
tcgaaataccagacgctgaaacagttgatgggctatccgcccaatgcgcagcttacagtt
gcctacgatacattgcagctaaccagtgaagtagcgcttgacacgctgcaactcgtaaat
ccacagaatcggatcgagtatcagcttttgcagacgcaggggcggttgctcaatgccagt
gtgcgttataaccgatgggcctatctgccaaccgtatcggcatatggaacctataacctg
ctctatcagaacaatgcattctcgcagctttatgcacagacgtttcctaactctgctatt
ggtttggccgtggccttacccatttttcaagggggccgacgaattcagcaattgaaaatt
tcagagttgcaggtacagcgtctggactgggacctggcggctttgaccagtgccgtcgat
gctgagtatgcacaggccctggcaacgtataaaggcaatctggctaactacagggctctg
ctcgaaaaccagcaactggccgaagatgtatatcgggtcatcaatctgcaatatcggtcg
ggcataaaaacctatctggatgtaaccattgccgaggctgaccttcgtacggcccggctg
aatgtgtttaacgctttatatcaggtcctgatcagtaaactggacgttcagcagtcgctg
ggtgccattcggtttgctgaataa
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