Spirosoma sp. SC4-14: WBJ53_27315
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Entry
WBJ53_27315 CDS
T11499
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
spio Spirosoma sp. SC4-14
Pathway
spio01501
beta-Lactam resistance
spio01503
Cationic antimicrobial peptide (CAMP) resistance
spio02020
Two-component system
spio03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
WBJ53_27315
09132 Signal transduction
02020 Two-component system
WBJ53_27315
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WBJ53_27315
01503 Cationic antimicrobial peptide (CAMP) resistance
WBJ53_27315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spio02000
]
WBJ53_27315
02044 Secretion system [BR:
spio02044
]
WBJ53_27315
01504 Antimicrobial resistance genes [BR:
spio01504
]
WBJ53_27315
Transporters [BR:
spio02000
]
Other transporters
Pores ion channels [TC:
1
]
WBJ53_27315
Secretion system [BR:
spio02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
WBJ53_27315
RTX toxin transporter
WBJ53_27315
Multiple protein transporter
WBJ53_27315
RaxAB-RaxC type I secretion system protein
WBJ53_27315
Antimicrobial resistance genes [BR:
spio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
WBJ53_27315
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
WBJ53_27315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
HH_AprE
ATP-synt_DE
Motif
Other DBs
NCBI-ProteinID:
WXC14688
LinkDB
All DBs
Position
complement(6619179..6620681)
Genome browser
AA seq
500 aa
AA seq
DB search
MQVAWKSIGAIVALMLTTSLTGTYAQTNPNAESLSGAATASSASTPARLNLLQCIEIAQQ
NNITVRQGQLTVANSDLQLHQSRLNLLPTTSFQTNQGINGGYSINPQSNAFVQQTIHSSN
YQLNASFTVYNGMVLRNTVKQNELTLQASQQELNATKNNVSLTVAQNYLNVLTGTEQLAV
ARRQAEVTQAQLDRMQRLVSAGSAPEANLYELRATLASNQVDIVTAQNTVDLAKVALLQS
MNVPINQDFEVEPVNVPDPGLDPYTASVQQLYDVASSTLPEIKGADMRVKSAMLGVQVAK
GGLYPTLSLNAGLSTIYSSAATKSTPNGQTIQQTLGYFTDPNGNNLPVYTNSPQYDRLGV
SYGNQLKNNFSQSASLFLRVPIFQGNLSRNRVTTAKIQQQTAELTAQNTRLVLRQQIETA
YTNMRAAANKYRATQVQVSSLEKAFEVAESRLNAGAINATDYTIAKTNLDRARASLVQTK
YDYVFRTKILDYYQNKPLSF
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtggcgtggaaatcaatcggagccattgttgctctgatgctaacaacaagtctt
accggaacgtatgcccaaactaatccgaatgcggagtcgctcagcggtgccgcaacggct
tcatcggcatctactccggccaggctgaatttgttacaatgtattgaaattgcccagcag
aacaatattactgttcggcagggacagctaacagttgccaatagcgacttgcaactgcat
cagtcccggctgaatttgctgccaaccaccagttttcagaccaaccagggtataaacggt
gggtatagcattaaccctcagtcaaacgccttcgttcagcaaacgattcattccagtaac
taccagttaaacgcttcgtttacagtatataatggcatggtattgcggaatacggtcaaa
caaaatgaactgacattgcaggcaagccaacaggaactgaatgctaccaaaaataatgtt
tcgttgaccgttgcccagaactatctgaatgtgttgactggtacggagcagttagcggtt
gcccggcggcaagccgaagtgacccaggctcagctcgaccgtatgcagcgcctggtgagc
gctggctcggcgccggaagctaatttatatgaactgcgggctactctggccagtaatcag
gttgatattgtaaccgcccagaatacggtggacctggctaaagtggccttgttacagtcg
atgaatgtgcctatcaaccaggattttgaggttgagccagtgaatgtgcctgatcctggt
ctggacccctatacggctagtgtacagcaattatacgatgtagcatccagcacgttgccc
gagataaaaggggctgatatgcgtgtaaaaagtgctatgctgggtgtacaagttgctaaa
gggggcctttatccaacattgtcattgaatgcaggtttaagtacgatctattccagcgct
gccactaaatcaacccctaatgggcagacaattcaacaaacacttggctattttactgat
ccgaatggaaataaccttcccgtctacactaatagtccccaatatgaccggttgggagta
agctacggtaaccaacttaaaaataactttagccagtcagcgtctttgttcctgcgtgta
cctatttttcagggcaatttgtcgcggaaccgggtcactacagccaaaattcagcagcag
acagccgaactgactgctcagaatacccgattggtcctgcgccagcaaatcgaaacagcg
tataccaatatgcgtgctgctgccaacaagtatcgggcaacgcaggttcaggtttcatcg
ctcgaaaaagcgtttgaagtcgccgaaagccgtttgaatgccggagccatcaacgcaacc
gattacacgattgcaaaaaccaatctggatcgggcgcgggccagtctggtgcaaaccaag
tatgattacgtattcagaacgaaaattttagattattatcagaataaaccgcttagtttt
tag
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