Spirosoma sp. SC4-14: WBJ53_32065
Help
Entry
WBJ53_32065 CDS
T11499
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
spio Spirosoma sp. SC4-14
Pathway
spio01501
beta-Lactam resistance
spio01503
Cationic antimicrobial peptide (CAMP) resistance
spio02020
Two-component system
spio03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spio00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
WBJ53_32065
09132 Signal transduction
02020 Two-component system
WBJ53_32065
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
WBJ53_32065
01503 Cationic antimicrobial peptide (CAMP) resistance
WBJ53_32065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spio02000
]
WBJ53_32065
02044 Secretion system [BR:
spio02044
]
WBJ53_32065
01504 Antimicrobial resistance genes [BR:
spio01504
]
WBJ53_32065
Transporters [BR:
spio02000
]
Other transporters
Pores ion channels [TC:
1
]
WBJ53_32065
Secretion system [BR:
spio02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
WBJ53_32065
RTX toxin transporter
WBJ53_32065
Multiple protein transporter
WBJ53_32065
RaxAB-RaxC type I secretion system protein
WBJ53_32065
Antimicrobial resistance genes [BR:
spio01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
WBJ53_32065
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
WBJ53_32065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OEP
YPL108W_C
TP096X_C
Motif
Other DBs
NCBI-ProteinID:
WXC15609
LinkDB
All DBs
Position
complement(7751644..7753026)
Genome browser
AA seq
460 aa
AA seq
DB search
MRTKITGQIMIILLLSILSSKSLLYAQDRRGFSLNEAIQYAVEHNINVKNSALDALSAEA
RIRELKGVALPQVSASGQIIDNLIIQRVFLPAVFFDPKASPDAPAVPVQFGVSYSGNLTG
SLNQLLFDASYRLGLRAADTYRQLAQKNIQASKITVAEQVAKAYYGVLVNEQQIKLLDLN
INRVDTLYQNTVGLNKQGFAEKIDVSRLEVQLNNLKAERQNVQNLLELSYYLLKFQMGLG
INDAITLTEQIKDIDLDEVERTTVQPVTEQFDYNQRIEFATLQSQIELADLDVQSVAKRY
YPSLSAFVNYGYNAGRNKFSDMFTSPWFNLSTVGLNLSVPIFDGFQKKYQAAQKRFALQK
AQNSSTLLKNTIDLQIRQASVTLRNSLQTLRTQQRNVDLAKEVARVAKIKYQEGVGSNIE
VMDAENSYRQAQNNYFVSLYNFLQTKVDADKASGKLYPGQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaaagattaccgggcagatcatgataatcttactactcagtatactgagtagc
aagagcctgttgtatgctcaggatcgacgaggtttttcgctgaatgaagctattcagtat
gccgttgagcacaatatcaatgtaaaaaactcagcgttggatgctctgagtgctgaggct
cgcatccgtgagttaaaaggcgttgcgttaccacaggtaagcgccagcggacagattatc
gataacctaattattcagcgggtgtttcttcctgccgtatttttcgatccgaaagcgtct
cccgatgcaccagccgttccggtgcagtttggtgtgagttattcgggtaatttaaccggg
agccttaatcagctcttgttcgatgcgtcgtatcgactgggtttacgggctgccgacacc
tatcggcaactggctcagaaaaatattcaggcatcgaaaattacggttgctgagcaggtt
gcaaaggcttattacggtgtgttggtaaacgaacaacagataaaactgctcgacctgaac
ataaaccgggtcgatacgctgtaccaaaacacggttggtttgaacaagcagggatttgcc
gaaaaaatcgacgtaagccggttagaggttcagttgaataacctgaaagccgaacggcag
aatgttcagaatctgcttgaactgagctattatctgcttaagttccagatgggtttgggt
atcaacgatgctattacgcttaccgagcaaatcaaagatattgatctcgatgaagttgag
cgaacaacggttcagccagtgacagaacaattcgactacaatcaacgaattgaatttgca
acgttacaatcgcagattgagttggccgatctggatgttcagagtgttgccaaacgttat
taccctagcctttcggcttttgtcaactatggatataatgcgggtagaaataagtttagc
gatatgtttacatcgccctggttcaatctgtcgacggtaggtcttaatctatccgttccc
atcttcgatggttttcagaagaaataccaggctgcacaaaagcggtttgcgctgcaaaag
gctcagaatagcagcacattgttgaaaaataccattgatctgcaaattcggcaggcatcg
gttacgcttcggaatagcctgcaaacgcttcggacccagcaacgaaatgttgatctggct
aaagaagtagcccgcgttgccaagatcaaataccaggaaggtgtaggctcaaacatcgaa
gtaatggacgccgaaaactcatatcggcaggcccaaaataattacttcgtgtcgctctat
aattttctgcaaaccaaagtagatgccgataaggccagcggcaaactctatcctggccag
taa
DBGET
integrated database retrieval system
