Spirosoma pollinicola: CWM47_18560
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Entry
CWM47_18560 CDS
T05236
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
spir
Spirosoma pollinicola
Pathway
spir01501
beta-Lactam resistance
spir02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CWM47_18560
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CWM47_18560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spir02000
]
CWM47_18560
01504 Antimicrobial resistance genes [BR:
spir01504
]
CWM47_18560
Transporters [BR:
spir02000
]
Other transporters
Pores ion channels [TC:
1
]
CWM47_18560
Antimicrobial resistance genes [BR:
spir01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CWM47_18560
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CWM47_18560
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CWM47_18560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CoA_trans
Relaxase_C
Motif
Other DBs
NCBI-ProteinID:
AUD03650
UniProt:
A0A2K8Z181
LinkDB
All DBs
Position
complement(4425502..4426998)
Genome browser
AA seq
498 aa
AA seq
DB search
MERPSRINSPRNRSNTIIIKPLHQILAQGSIACLLFLSSCQLPNTVIKSSTRPVPVTFRG
QSDSAGIAGQNWRTFFADPQLTQLIDTALAGNLDLRVATQRIEMARASFNYSQGFLAPQV
NAVASAGVDRYGRYTMTGVGNYDTNLSDNVQGNQLTPTPTPDYFLGARSTWEVDIWGKLR
NRKKAAYIRLLASEKGRHAVITGLVAEIARHYYALLALDGELEILQKNIDYQQNALTLVR
IQKEAGRVTELAVQQFSAQLLNTRSRQGQVQQQIVENENQLNRLLGRYPQPIARGNSLQA
RELPGQALTGIPAQMLIRRPDIRQAELDLQAANIDIDVARAEFLPSLNLTAYVGLNAFRT
AVLFNPMSIAAGLLGSLSAPILNRRFVKANYQQSVAQSRESLFRYQQTILTGFSEVSTQL
KGVENYRTVAELQAQEVAVLEQAVSTSNDLFRSGYASYLEVITAQRSVLEAELALITTKQ
SQFLALTDLYRALGGGWE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggaacggccatcccgaattaattcaccgcgcaaccggagcaatacaattataatcaag
cccttacaccagatactagcccagggcagtattgcctgtctgctgtttctgagcagttgt
caattacccaatacggtaataaaatcgtcaacccggcccgtacctgttaccttcaggggt
caatcggattcggcgggtattgccggtcagaactggcggacgttctttgccgatcctcaa
ctgacgcaactcatcgacaccgctctggcgggtaatctggatttacgggttgcgacacaa
cggatcgaaatggcgcgggcttccttcaattacagccagggatttctggctccccaggtt
aacgcggtggcatcggcgggagtcgatcggtacggacgttacacgatgacaggtgttgga
aattacgacacgaacttatccgacaatgttcagggaaatcagcttacccccacccccacc
cccgactattttctgggtgcccgcagcacatgggaagtcgatatttgggggaagctccgc
aaccgaaaaaaagcagcttatatacggcttctggcttccgaaaaagggcgtcacgcggtc
ataacgggcctggtggctgaaattgcgcggcattattacgccctgctggcgttggatggc
gagctggaaattctccaaaaaaatattgactatcaacagaacgcgctgactctggtccgc
atacaaaaagaagcgggccgggtaacggaactggccgttcagcaattctctgcccagctt
ctcaatacccgaagtcggcagggacaggttcagcagcagattgtcgagaacgagaatcag
ttgaaccgattactgggacgctatccgcaacccattgcccgtggcaattcccttcaggct
cgtgaacttcccggtcaggcgttaacgggtatcccggcacagatgctgattcgccgaccc
gacattagacaagcggaactcgatcttcaggccgccaatattgacatcgacgtggcccgt
gcggaatttctgcccagcctgaacctgacggcttacgtaggcttgaacgcgttccgaacg
gcggtactcttcaatccgatgtccattgctgcgggtttgctgggcagtttatcggcacca
atcctgaaccgacgctttgtcaaagccaactaccagcaatcggtggcgcagagtcgggaa
tcgctgtttcgctatcaacaaaccattctaacgggtttcagcgaggtttcgacccaactg
aagggcgttgagaattaccggacagtagccgaactccaggcacaggaagtagccgttctg
gagcaggccgtctcgacatcaaacgacttgtttcggagtgggtacgcgtcgtatctggaa
gtaattaccgcccaacggagcgtgctggaagcggaactagcccttattacaaccaagcag
tctcaatttctggccctgacggatctgtaccgggcgttgggtggcggctgggagtag
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