Sphingobium sp. JS3065: NUH86_18730
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Entry
NUH86_18730 CDS
T10812
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
spjs Sphingobium sp. JS3065
Pathway
spjs01501
beta-Lactam resistance
spjs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spjs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NUH86_18730
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NUH86_18730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spjs02000
]
NUH86_18730
01504 Antimicrobial resistance genes [BR:
spjs01504
]
NUH86_18730
Transporters [BR:
spjs02000
]
Other transporters
Pores ion channels [TC:
1
]
NUH86_18730
Antimicrobial resistance genes [BR:
spjs01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NUH86_18730
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
NUH86_18730
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
NUH86_18730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
LPAM_1
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
UZW57611
LinkDB
All DBs
Position
2:291938..293314
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AA seq
458 aa
AA seq
DB search
MKRALLTLSSMAALSACNMAPHYVRPAPPVPAGFPSGPAYAPVVATEKPGLPWTALVTDP
RLRTVIERALANNRDLRAALANVEAARAQYQVQRAAQLPAVTGEAAATLSRRNDDRQNSY
SADIGFSAFEIDLFGRVKNLTRSALESYLATEEGARATRITLIAETATAYATLAADQELL
VLSRQTLTSAERTLALVQSLNGAGLTGKLDVHQAETTVEQARSDIAANVTQVAQDRNALD
LLAGAPVEDALLPPSLEALTGGIAKTPAGLSSDVLLQRPDVLQAEHQLKAANADIGAARA
AMFPKISLTAAIGVASSALSSLFTNGGFAWSAAPSASMPVFGGGARGNLDYSKAQRDISL
AQYERAIQTAFQEVSDALAREGTIDDQQAAQQRLVLASQRSYALADERYRAGIDTFLNSL
TSQRSLYNARQSAIATNLTLIRNRILLYRVIGADFAGG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgcccttctgaccttgtcctccatggccgcgctgtcggcctgcaacatggcg
ccgcactatgttcgccccgcgccgcccgtgcctgccggtttccccagcggtccggcctat
gcacctgtggtcgccactgaaaagccaggactgccctggaccgctctggtgaccgatccg
cgcctcaggacggtgatcgaacgtgccctcgccaataatcgcgacctgcgcgccgcgctc
gccaatgtggaggccgcccgcgcccaatatcaggtccagcgcgccgcccagcttcccgcc
gtcacgggcgaggcagccgccaccctttcccgccggaacgacgaccgccagaatagctac
agcgccgacatcggcttcagcgcgtttgagatcgacctgttcggccgggtgaaaaacctg
acccggtcggcgctggaatcctatctcgcgacggaggaaggggcgcgggcgacccgcatc
accctgatcgcggagacggccactgcctatgcgacactggccgccgaccaggaactgctt
gtcctttcccgccagaccctgaccagcgccgaacgcacactggctcttgtccagtcgctg
aacggcgcggggctgaccggcaagctggacgtgcatcaggccgaaaccacggtggaacag
gcgcgcagcgacatcgccgcgaacgttacccaagtggcgcaggaccggaacgcgctcgac
ctgctggccggcgcaccggtcgaggacgccctgctgcccccatcgctcgaagcgctgacc
gggggcatcgcgaagacgcccgcaggcctttcctccgacgtgctgctgcaacgccccgac
gtgcttcaggcggaacatcagctcaaggccgccaatgccgatatcggcgcggcccgcgcc
gccatgttcccgaagatcagcctcacggccgccatcggcgtggcgagttcggccctgtcc
tcgctcttcaccaacggcgggttcgcctggtccgccgcgccgtccgcctccatgccggtc
ttcggcggcggtgcgcggggcaatctcgactacagcaaggcgcaacgcgacatcagcctt
gcccaatatgaaagggcgatccagaccgcgttccaggaagtgtccgacgccctggcccgc
gaaggcacgatagacgatcagcaggccgcgcagcagcgcctggtcctcgccagccagcgc
agctacgccctggcggacgaacgctatcgcgctggcatcgacaccttcctcaacagtttg
accagccagcgcagcctctacaacgcccggcaaagcgccatcgcgacgaacttaacgctg
atccgcaaccgcatcctgctctatcgcgtgatcggcgcggatttcgcgggaggatga
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