Sphingomonas sp. LK11: AV944_07220
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Entry
AV944_07220 CDS
T04954
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
splk
Sphingomonas sp. LK11
Pathway
splk01501
beta-Lactam resistance
splk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV944_07220
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AV944_07220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_07220
01504 Antimicrobial resistance genes [BR:
splk01504
]
AV944_07220
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_07220
Antimicrobial resistance genes [BR:
splk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AV944_07220
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AV944_07220
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AV944_07220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
APX65673
LinkDB
All DBs
Position
complement(1515121..1516557)
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AA seq
478 aa
AA seq
DB search
MAKPLRRWVAGATLALLGGCSMAPAYYPPVLPAPVAYKEMPTAGDAIWKPVDTAATALTA
DWWTGFGDPLLDRLEARIDSDNPTLAGALARYDMARATLAGARSGLFPRVELTPSLLRNR
QSDERPLRGGSQPDFYTAATLGGDISYEADLWGRVRNSVASGRALAEASRDDLAAVKLAL
QGQLAADFVRLRGQDQQLALLSQTIDAFARADALTRNRFRGGIATGMDVGRAGALLGEAR
AQYAALQADRAVTEHAIASLVGQPASIFSIPRRDIPLHLPSVPVGVPSALLAKRPDVAAA
ERRMAAANARIGVAKAAFFPQITLGGTGGFQSTALAGLVAAPNIFWAIGPGAILNLFDGG
KRRADIAAARADWNAAAADYRARALGAFQDVEDALATLRHLDEAQAAQDQAVRSAASTSA
IALDRYIKGAATYLDVATAQENLLRDQQSALSLQTQRLTATVALARALGGGSAFARPA
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaccgctccgccgctgggtcgcaggcgcgacgctcgcgctgctgggcggttgt
tcgatggccccggcctattacccgccggtcctgcccgcacccgtcgcgtataaggagatg
ccgaccgccggggacgcgatatggaagccggtggataccgcggccaccgccctgaccgcc
gactggtggaccggcttcggcgatccgctgctcgaccggctggaggcgcggatcgacagc
gacaatcccacgctggccggggcgctggcccgctatgacatggcgagagccacgctcgca
ggcgcgcgttcggggctgtttccccgtgtcgaactgacgcccagcctcttgcgcaacagg
cagtcggacgagcgtcctttgcgtggcggctctcagccggatttctataccgccgcgacg
ctggggggcgacatatcctatgaggccgatctgtgggggcgtgtgcgcaactcggtcgcc
tccggtcgtgcgctcgccgaggccagccgcgacgatctggcggcggtcaagctcgccctt
caggggcaattggcggccgacttcgtgcgtttgcgggggcaggaccagcaattggcgctg
ctcagccagacgatcgatgcctttgccagggccgatgcgctgacccgcaaccgctttcgc
ggcggcatcgcgacgggcatggatgtcggccgagccggtgcgctgctcggcgaagcgcgc
gcccaatatgccgcgttgcaggcggatcgcgccgtgaccgaacatgcgatcgccagcctg
gtcggccagcccgcctcgatcttctccatcccgcgtcgcgatatcccgctccatctgccg
agcgttccggtcggcgttccctccgcgctgctcgccaagcgtcctgatgtcgcagcggcc
gagcggcgcatggcggcggccaatgcgcggatcggcgtcgccaaggcggccttctttccc
cagatcacgctgggcggcacggggggatttcagagcacggcgctggcgggactggtcgcg
gcccccaacatcttctgggcgatcggaccgggcgcgatcctgaacctgttcgatggcggc
aagcgtcgcgccgatatcgccgccgcgcgggcggactggaacgccgccgctgccgactat
cgggcgcgtgccctgggggcatttcaggatgtcgaggacgccctcgccacgctgcgtcac
ctcgacgaggcccaggccgcgcaggaccaggcggtacgatccgccgccagcaccagcgcg
atcgcgctggaccgctatatcaagggcgccgcgacctatctggacgtcgccaccgcccag
gagaacctgcttcgcgaccagcaaagcgcgctgtccctgcagacccaacgcctgaccgct
accgtcgccctggcccgcgcgctggggggcggatcggcattcgcgcgaccggcctag
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