KEGG   Sphingomonas sp. LK11: AV944_07220
Entry
AV944_07220       CDS       T04954                                 
Name
(GenBank) RND transporter
  KO
K18139  outer membrane protein, multidrug efflux system
Organism
splk  Sphingomonas sp. LK11
Pathway
splk01501  beta-Lactam resistance
splk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:splk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AV944_07220
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    AV944_07220
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:splk02000]
    AV944_07220
   01504 Antimicrobial resistance genes [BR:splk01504]
    AV944_07220
Transporters [BR:splk02000]
 Other transporters
  Pores ion channels [TC:1]
   AV944_07220
Antimicrobial resistance genes [BR:splk01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    AV944_07220
   Multidrug resistance, efflux pump MexJK-OprM [MD:M00642]
    AV944_07220
   Multidrug resistance, efflux pump MexXY-OprM [MD:M00643]
    AV944_07220
SSDB
Motif
Pfam: OEP
Other DBs
NCBI-ProteinID: APX65673
LinkDB
Position
complement(1515121..1516557)
AA seq 478 aa
MAKPLRRWVAGATLALLGGCSMAPAYYPPVLPAPVAYKEMPTAGDAIWKPVDTAATALTA
DWWTGFGDPLLDRLEARIDSDNPTLAGALARYDMARATLAGARSGLFPRVELTPSLLRNR
QSDERPLRGGSQPDFYTAATLGGDISYEADLWGRVRNSVASGRALAEASRDDLAAVKLAL
QGQLAADFVRLRGQDQQLALLSQTIDAFARADALTRNRFRGGIATGMDVGRAGALLGEAR
AQYAALQADRAVTEHAIASLVGQPASIFSIPRRDIPLHLPSVPVGVPSALLAKRPDVAAA
ERRMAAANARIGVAKAAFFPQITLGGTGGFQSTALAGLVAAPNIFWAIGPGAILNLFDGG
KRRADIAAARADWNAAAADYRARALGAFQDVEDALATLRHLDEAQAAQDQAVRSAASTSA
IALDRYIKGAATYLDVATAQENLLRDQQSALSLQTQRLTATVALARALGGGSAFARPA
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggctaaaccgctccgccgctgggtcgcaggcgcgacgctcgcgctgctgggcggttgt
tcgatggccccggcctattacccgccggtcctgcccgcacccgtcgcgtataaggagatg
ccgaccgccggggacgcgatatggaagccggtggataccgcggccaccgccctgaccgcc
gactggtggaccggcttcggcgatccgctgctcgaccggctggaggcgcggatcgacagc
gacaatcccacgctggccggggcgctggcccgctatgacatggcgagagccacgctcgca
ggcgcgcgttcggggctgtttccccgtgtcgaactgacgcccagcctcttgcgcaacagg
cagtcggacgagcgtcctttgcgtggcggctctcagccggatttctataccgccgcgacg
ctggggggcgacatatcctatgaggccgatctgtgggggcgtgtgcgcaactcggtcgcc
tccggtcgtgcgctcgccgaggccagccgcgacgatctggcggcggtcaagctcgccctt
caggggcaattggcggccgacttcgtgcgtttgcgggggcaggaccagcaattggcgctg
ctcagccagacgatcgatgcctttgccagggccgatgcgctgacccgcaaccgctttcgc
ggcggcatcgcgacgggcatggatgtcggccgagccggtgcgctgctcggcgaagcgcgc
gcccaatatgccgcgttgcaggcggatcgcgccgtgaccgaacatgcgatcgccagcctg
gtcggccagcccgcctcgatcttctccatcccgcgtcgcgatatcccgctccatctgccg
agcgttccggtcggcgttccctccgcgctgctcgccaagcgtcctgatgtcgcagcggcc
gagcggcgcatggcggcggccaatgcgcggatcggcgtcgccaaggcggccttctttccc
cagatcacgctgggcggcacggggggatttcagagcacggcgctggcgggactggtcgcg
gcccccaacatcttctgggcgatcggaccgggcgcgatcctgaacctgttcgatggcggc
aagcgtcgcgccgatatcgccgccgcgcgggcggactggaacgccgccgctgccgactat
cgggcgcgtgccctgggggcatttcaggatgtcgaggacgccctcgccacgctgcgtcac
ctcgacgaggcccaggccgcgcaggaccaggcggtacgatccgccgccagcaccagcgcg
atcgcgctggaccgctatatcaagggcgccgcgacctatctggacgtcgccaccgcccag
gagaacctgcttcgcgaccagcaaagcgcgctgtccctgcagacccaacgcctgaccgct
accgtcgccctggcccgcgcgctggggggcggatcggcattcgcgcgaccggcctag

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