Sphingomonas sp. M1-B02: OKW87_03180
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Entry
OKW87_03180 CDS
T11063
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
spmb Sphingomonas sp. M1-B02
Pathway
spmb01501
beta-Lactam resistance
spmb01503
Cationic antimicrobial peptide (CAMP) resistance
spmb02020
Two-component system
spmb03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spmb00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
OKW87_03180
09132 Signal transduction
02020 Two-component system
OKW87_03180
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OKW87_03180
01503 Cationic antimicrobial peptide (CAMP) resistance
OKW87_03180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spmb02000
]
OKW87_03180
02044 Secretion system [BR:
spmb02044
]
OKW87_03180
01504 Antimicrobial resistance genes [BR:
spmb01504
]
OKW87_03180
Transporters [BR:
spmb02000
]
Other transporters
Pores ion channels [TC:
1
]
OKW87_03180
Secretion system [BR:
spmb02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
OKW87_03180
RTX toxin transporter
OKW87_03180
Multiple protein transporter
OKW87_03180
RaxAB-RaxC type I secretion system protein
OKW87_03180
Antimicrobial resistance genes [BR:
spmb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
OKW87_03180
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
OKW87_03180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
INO80_Ies4
Motif
Other DBs
NCBI-ProteinID:
UZK66854
LinkDB
All DBs
Position
636841..638427
Genome browser
AA seq
528 aa
AA seq
DB search
MRLSSLLLGASLTAVVTPAAAQTVTTRQGTATPVTVQTREQTATPALAPAAQPTTDLRAA
LVQTYRSNPDLAGERANQRANDENVPIARSQGRPGATSNMSLSDSLYDSDATFGPSRTGR
LGLDISLPVFSGGAVRNSVRAAETRVNAGQANLRGAESDIFTQAVTVYVDVLRDEAIVRL
NQQNVRVLDVNLRATRDRFEVGDLTRTDVAQSEARLALAQGQLRTAEARLIGSRENYIRV
VGTPPGVLAAPPPLPNLPDDVATAEQIALGNNPFLEATQLARDASRFDVRVARAGRLPQV
SIGLGGNYYNYLGSVGSQGARLGFQDDGFASTLGAQVSIPVFQGGRPAAQIRQAQAREAA
AMENVTLTERGVIAQARSSFATYESSLRVIESSRIAVEANQLSLEGVRAENSVGTRTILD
ILNAEQELLNSQVQYVTAERDAYVAGFTLLASMGRAEAKDLNLDGGPLYDPAVNYDRVKG
RWNDWSNDPAPTAASTPTTGTPAQGAIVPPGQVDPLLQRSVDTTRTNP
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcgactatcctctctgcttctgggcgcgagcttgactgcggtcgtaacgcctgccgcc
gcgcagaccgtgacgactcgccagggcaccgcgacgccggtgaccgtccagacgcgggag
cagaccgcaactccggcgctggccccggccgcgcaaccgacgacggacctgcgcgcggcg
ctggtgcagacctatcggagcaaccccgatctggcaggcgagcgcgccaaccagcgcgcc
aatgacgagaatgtgccgatcgcccgatcgcagggacggcccggggccacttcgaacatg
tcgctcagcgacagcctgtacgacagcgacgcgaccttcggcccgagccgaacgggccgg
ctggggctcgacatatcgctgccggtcttcagcggcggcgcggtgcgcaattcggttcgg
gcggcggagactcgggtgaatgcaggccaggccaatctgcgtggcgccgaatcggatatc
ttcacccaggcggtgacggtctatgtcgacgtgctgcgcgacgaagcgatcgtgcggctg
aaccagcagaatgttcgcgtgctcgacgtcaatctgcgcgcaactcgcgatcgattcgaa
gtaggcgacctgacccgcaccgacgtcgcccagtccgaggcgcggctggcgctggcgcag
ggccagttgcggaccgccgaggcgcggctgatcggcagccgcgaaaattatatccgcgtg
gtcggcaccccgccgggggtgctcgccgcaccgccgcccttgcccaatctgcccgacgat
gtggcgacggcggagcagatcgcgctgggcaacaatcctttcctggaggccacgcaactc
gcgcgcgatgcgagccgattcgacgtgcgggtggcgcgcgccgggcggctgccgcaggtg
agcatcgggctgggcggcaattattataattatctgggctcggtcggtagccagggcgcg
aggctgggttttcaggacgacggcttcgcctccacgctgggcgcgcaggtctcgatcccg
gtcttccagggcgggcggccagcggcccagattcgccaggcgcaggcgcgggaggccgcg
gcgatggagaatgtgacgctcaccgagcggggcgtgatcgcgcaggcacgctcgtccttc
gccacctatgaaagttcgctgcgggtgatcgaatcgtcgcggatcgcagtcgaggccaac
caattaagcctggagggcgttcgcgccgagaacagcgtcggcacccgcacgatcctcgac
atcctgaacgccgagcaggaattgctgaacagccaggtgcaatatgtcaccgccgagcgc
gacgcctatgtcgccggcttcacgctgcttgcgtcgatgggccgcgcggaggcgaaggac
ctgaacctcgacggcgggccgctgtacgacccggcggtcaattacgatcgggtgaagggc
cgctggaacgactggtcgaacgatcccgcgccgaccgccgcgagcaccccgacgaccgga
accccggcgcagggcgcgatcgtcccgcccggacaagttgatcccttgctgcagcgatcg
gttgacaccacccgtactaatccttga
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