Sphingomonas sp. R1: OIM94_13875
Help
Entry
OIM94_13875 CDS
T11062
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sprr Sphingomonas sp. R1
Pathway
sprr01501
beta-Lactam resistance
sprr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OIM94_13875
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OIM94_13875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_13875
01504 Antimicrobial resistance genes [BR:
sprr01504
]
OIM94_13875
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_13875
Antimicrobial resistance genes [BR:
sprr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OIM94_13875
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
OIM94_13875
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
OIM94_13875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UYY76595
LinkDB
All DBs
Position
complement(2899104..2900621)
Genome browser
AA seq
505 aa
AA seq
DB search
MKRALTLLSTAALAGCSMAPKDVRPAAPVPTSWPVGDSYLRENEATLPALNWRDVFRDAR
LQRLIEQALANNRDLRVAAANIAAARAQYQVQRGAQFPQVDASAGITERRGTATTNGTGT
GTTTGGTGTGGTGTSAGNGTGLRTNYTTQAGITGFELDLFGRLASLTRQQQNTYFATEAG
ARATRLTLVGDIATAWLTYASDASLLAVAQQTARSAEDTVRLTRARLDGGIAPRTDLRQA
EQTLATAQNSIARQTTLLAQDVNALRLLAGSEIDPALLPASIEEAGPTIAAVPAGIDSSI
LLRRPDVVQAEYQLRAANAQIGAARAALFPRISLTSVLGFASSALSSLFDGDAFNWQAGG
TASYSIFRGGAGRATVRLSEAQQQAAVASYERAIQTAFRDVANALATRGTLDAQLRATQL
QADAAADTFRLSEARYRGGIDTFLQSLVSQRSLYTAQQQLVTIQLTAATNRVDLYRALGG
DSQLNVTPQGPQPVVAPGTADGTGG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgcgctgaccctgctctccaccgccgcgctcgccggctgctcgatggcgccc
aaggacgtgcgccccgcagcgcccgtgccgacgagctggccggtgggcgactcctatctg
cgcgagaacgaggcgacgctgcccgcgctcaactggcgcgacgtgttccgcgatgcgcgc
ctgcagaggctgatcgagcaggcactggccaacaatcgcgatctgcgggtggcggcagcg
aacatcgcggcggcacgcgcgcaatatcaggtccagcgcggcgcgcagttcccccaggtc
gatgccagcgccggcatcaccgagcgtcgcggcacggcgaccaccaatggcacggggacc
ggcacgaccacgggcggcacgggcacgggcggcacgggcaccagcgccggcaacggcacc
gggctgcgcaccaactacacgacgcaggccggcatcaccggcttcgagctggacctgttc
ggccggctcgcctcgctcacccggcagcagcagaacacctatttcgccaccgaggccggt
gcgcgcgcgacgcggctgacgctggttggcgacatcgcgacggcctggctcacctacgcc
tcggacgcgagcctgctcgccgtggcgcagcagaccgccaggagcgccgaggacacggtg
cggctcacccgtgcgcggctcgacggcggcatcgccccgcgcaccgatctgcgccaggcc
gagcagacgctcgccaccgcgcagaacagcatcgcgcgccagaccacgctgctcgcgcag
gacgtcaacgcgctgcgcctgctcgccggatcggagatcgaccccgccctgctccccgcc
tcgatcgaggaagccggcccgaccatcgccgccgtgcccgccgggatcgattcgagcatc
ttgctgcgccggccggacgtggtgcaggccgaatatcagctgcgcgccgccaatgcccag
atcggcgcggcgcgcgcggccctgttcccgcgcatcagcctcaccagcgtgctggggttc
gccagctcggcgctgtccagcctgttcgacggcgatgcattcaactggcaggcgggcggc
accgccagctattcgatctttcgcggcggcgccggccgggcgacggtacggctgagcgag
gcacagcaacaggctgccgtcgcgagctacgagcgcgcgatccagacggcctttcgcgac
gtcgccaacgcgctggcgacgcgcggcacgctggatgcccagctgcgcgccacccagctc
caggccgacgccgccgccgacaccttccggctcagcgaggcgcggtatcgcggcgggatc
gacaccttcctgcagagcctggtctcgcagcgctcgctctatacggcgcagcagcaattg
gtgacgatacagctgaccgcggcaaccaaccgcgtcgacctgtaccgcgcgctgggcggg
gattcgcagctgaacgtgacgccgcaggggccgcaaccggtggtggcgcccggaaccgcc
gacggcacaggcggttga
DBGET
integrated database retrieval system
