Sphingobacterium sp. R2: VXM68_16510
Help
Entry
VXM68_16510 CDS
T10631
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz01501
beta-Lactam resistance
sprz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VXM68_16510
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VXM68_16510
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_16510
01504 Antimicrobial resistance genes [BR:
sprz01504
]
VXM68_16510
Transporters [BR:
sprz02000
]
Other transporters
Pores ion channels [TC:
1
]
VXM68_16510
Antimicrobial resistance genes [BR:
sprz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VXM68_16510
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VXM68_16510
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
VXM68_16510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
XCY04245
LinkDB
All DBs
Position
complement(3992018..3993457)
Genome browser
AA seq
479 aa
AA seq
DB search
MTNRRKIQWVIAISLSAAVTGCKVPKATQIQENKFVPQQFTDVEKSDTTNSASVKWREFF
TDPNLVVLIDTALKNNQELNVTLQELAIAKNDILLRKGALKPTVGLRAGGGVEKVGRYTS
QGAGDASTEIAPGKEMPDPLGDLTIGAYASWEIDVWKKLKDSEQAALNRYLATVEGKNFV
LSSLIAEVARSYYELLALDNQLTIIKQNIELQDNALAVIRLQKQAARVTELAVQKFEAEV
LKTKGMEFETRQQIKETENRINFLLGRFPQEIKRDKSNFVDLIPAKVQTGIPSQLLSNRP
DIREAEYELTAAKLDVNIARKEFYPSLEISAALGLQAFKPSYLFKMPESVLYNLIGELAA
PLINKNGLKAEFNTANAKQIQAVYNYEKTILNAYLEVSTQLSNIENLGRSYDFKTKEVEV
LNNSVSVSNDLFKSARADYMEVLMTQRDVLDSKLELIETKKQQLNAVVNIYKDLGGGWK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcgcagaaaaatacaatgggtcattgcaatttcgctttcagcagcagtgacg
ggatgtaaggttccgaaagcgacacaaatacaggagaataaatttgttccgcagcaattt
acagacgtagagaaatctgacacaacaaattcagcatcggttaagtggcgtgaatttttt
actgatccaaatctagttgtattaatagatacagcgttaaaaaacaatcaggaactgaat
gttactttgcaggagttggcaatcgcaaagaatgatattcttttacgaaaaggggcgttg
aaacctaccgttggtttacgtgcgggaggaggtgttgaaaaagttgggcgatatactagc
cagggggcgggtgatgccagcacagaaattgctcctggaaaggaaatgccggatccacta
ggagatttgacaattggtgcgtatgcaagctgggaaatcgacgtttggaaaaaacttaag
gactccgagcaagccgcactcaaccgctaccttgctacggtagaggggaaaaattttgtc
ttgagtagccttattgccgaggttgcccgttcgtattatgaattattggcattggataat
cagttgaccattatcaaacagaatatcgagctacaggacaatgcacttgcggtaatccga
ttgcagaagcaggctgctcgtgtaacagaactggcggttcaaaagtttgaggctgaagtg
ttgaaaaccaaaggtatggaatttgagacgaggcaacaaatcaaagaaactgaaaaccgt
attaattttctattggggcgttttccacaagagatcaaacgcgacaaaagcaattttgtc
gatttgatcccggcgaaggttcagacaggcataccgagccaattactgagcaatagacct
gatattcgtgaggcagagtatgaactcactgcagccaaattggatgtaaatattgcacgg
aaagagttttatccctctttggagatttcggctgctttgggtttacaggcatttaaacct
tcttacttgtttaagatgccggaatcggttttatacaatttaattggggagcttgcggca
ccattgatcaataaaaatgggcttaaagcggaatttaatacggctaacgccaaacaaata
caggctgtatataattacgagaagacaattctgaatgcttacttagaagtctctacacaa
ctttctaatattgaaaacctagggcgcagctacgatttcaaaacaaaagaagttgaggtt
ctcaataattccgtgtctgtgtcaaatgatctctttaaatcagcgagggcagactatatg
gaggttttgatgacacaacgcgatgtgctggattcgaaacttgaattgatagaaacgaag
aagcagcagctcaatgctgttgtcaatatctataaagatttgggaggaggctggaaataa
DBGET
integrated database retrieval system
