Sphingobacterium sp. R2: VXM68_21490
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Entry
VXM68_21490 CDS
T10631
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz01501
beta-Lactam resistance
sprz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VXM68_21490
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VXM68_21490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_21490
01504 Antimicrobial resistance genes [BR:
sprz01504
]
VXM68_21490
Transporters [BR:
sprz02000
]
Other transporters
Pores ion channels [TC:
1
]
VXM68_21490
Antimicrobial resistance genes [BR:
sprz01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
VXM68_21490
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
VXM68_21490
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
VXM68_21490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Spectrin
Motif
Other DBs
NCBI-ProteinID:
XCY05216
LinkDB
All DBs
Position
5168604..5170043
Genome browser
AA seq
479 aa
AA seq
DB search
MNKNKLYHYTGFALFLLSLAACKPLEIKQRTENKNVPEKYSNAESDTLNTGKINWKNYFK
DPNLQGLIGQALANNQELHIMLQEIQIAQNEVSAKKGEYLPSVGVKVGAGVDKVSRYTNI
GAMEKNTEIEPGREMPEPLFDFGVGVQAQWETDIWGKLHNATKAQLQRYFASVEGKNFMV
THLIAEIADSYYELLALDNELLVINENVKIQNNALAVVNDLKKNARSNKLAVKRFEAQIL
KTQGMQYDIKQKITETENRINYLVGRFPQPVQRDQQSFDKLVPQTVYAGIPADLLENRPD
IKQAEYELAASKLDIKSAKARFYPSLDIAAGVGFQAFDPTYLIKPESFLSSLVGELTAPL
INKRAIKAAYYSANARQVQAVYHYEQTILAAYIEVANQLSKIKNLENGLQIKTKEVDALN
ESIGISNDLFKYARADYMEVLLTQRDALESKFELVEKKVNQLKASVAIYRSLGGGWDHQ
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaataaattatatcactatacaggtttcgcgcttttcttgcttagtcttgcg
gcctgcaaaccacttgaaataaaacaacgtactgaaaataaaaacgtacctgagaaatat
agtaatgctgaaagcgacaccttgaatactggaaaaatcaattggaaaaactattttaag
gaccccaacttacaaggactcatcgggcaggcattggcaaacaaccaggagctacatatt
atgcttcaggaaattcaaattgcccaaaacgaggtaagtgccaaaaaaggtgaatatcta
ccttctgttggtgtaaaagttggtgccggagtcgacaaagtgagtcgttacacgaacatt
ggagcgatggaaaagaatacagaaatcgaacccggccgtgaaatgcctgaaccgctattt
gattttggagtaggtgtacaagcacaatgggaaacagatatctggggtaaactccataac
gcaacgaaggctcagttacagcggtattttgcaagtgtagaaggcaaaaactttatggtc
actcatctgatcgctgaaattgcagattcctactatgaactccttgcactcgacaatgaa
ctcctagttatcaatgagaatgtaaagattcaaaacaatgcgctggctgtcgtcaatgac
ttgaagaaaaatgcacgatccaataagcttgccgtcaaaagatttgaagcccagatattg
aaaacccaaggtatgcaatatgatatcaagcagaaaatcacagaaacagaaaatagaata
aactaccttgttggaagattcccgcagccggttcaaagggatcaacaatcatttgataag
cttgttccgcaaaccgtttatgcaggcatcccggccgatctcttggagaacaggccagat
attaagcaggcggagtatgaacttgctgcatccaaactggatattaaatcggccaaagcc
cgcttttacccgtctttggacattgcggcaggagtaggttttcaagcttttgatccgact
tatctcattaagccagaatcttttctttcttccctcgttggtgaactcaccgcccctctg
atcaacaaacgggcaattaaagccgcttattacagcgcaaatgcacgacaggttcaggct
gtttaccattatgagcaaaccatattggctgcttatattgaagttgcaaaccaactctct
aaaattaaaaacctggagaatggcctacaaattaagaccaaggaagtggatgcattaaat
gagtctatcggtatttccaacgacctttttaaatacgcccgcgcagattatatggaagtt
ctactaacgcaacgcgatgccctggaatccaaatttgagcttgtggagaagaaggtcaac
caactcaaagcgagcgtagccatatacagatccctggggggtggatgggatcatcaatag
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