Shewanella psychromarinicola: EGC80_06530
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Entry
EGC80_06530 CDS
T09848
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
spsr
Shewanella psychromarinicola
Pathway
spsr01501
beta-Lactam resistance
spsr01503
Cationic antimicrobial peptide (CAMP) resistance
spsr02020
Two-component system
spsr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spsr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EGC80_06530
09132 Signal transduction
02020 Two-component system
EGC80_06530
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EGC80_06530
01503 Cationic antimicrobial peptide (CAMP) resistance
EGC80_06530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsr02000
]
EGC80_06530
02044 Secretion system [BR:
spsr02044
]
EGC80_06530
01504 Antimicrobial resistance genes [BR:
spsr01504
]
EGC80_06530
Transporters [BR:
spsr02000
]
Other transporters
Pores ion channels [TC:
1
]
EGC80_06530
Secretion system [BR:
spsr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
EGC80_06530
RTX toxin transporter
EGC80_06530
Multiple protein transporter
EGC80_06530
RaxAB-RaxC type I secretion system protein
EGC80_06530
Antimicrobial resistance genes [BR:
spsr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
EGC80_06530
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
EGC80_06530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AZG34610
UniProt:
A0A3N4DEB0
LinkDB
All DBs
Position
1509667..1511142
Genome browser
AA seq
491 aa
AA seq
DB search
MNFYDQSRALLGRFNLAKVQLKSLTRRLFSSPTRNLATLAFTGVLTVVSQPLLADEVVAL
SFAKAWQQVQRVSDSQQAQSAQVARAKGLEEAGEDMDWPSLQLTSSYSLLEKPLALDVAD
LGIDATSLPPALGQMLGALPSQFAFSEQDIFRTSLKAMWPIYTGGQITAAQGIHKAKVEE
KKQQQALATRELFLLLVNRYYGVAVAKATVETNQTLVDSLAVHLDHATKREQQGQIARVE
VLNAEVAYNNGKINLASAVRQWEMANIAMARMLKLPSVNLYSALFMLDESPSLPYLSQLT
LTQHPALKLLQAKEAQAEGLIDVEKGLYKPKVFLYGNYTLYEDDSTLSHIEPDWMVGVGL
TMPLISRDGRSGKVRAAKSALLQARYTKAQTQQDLSLLLDQNYRQLLQAEEESQSLDTSL
ALAKENLRLRDIAFNQGLSTSIDRVDAEIKLKAVHTQQLAAKYRYLQAYASLMTISGQLD
KFINNSNSLEK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttatgatcaaagccgcgccctacttgggcgctttaatttagccaaagtgcag
cttaaaagccttactcgtcgtctgtttagcagtccaacgaggaatctggctactttagca
tttacgggtgttttgactgttgtcagtcagccgctgcttgccgatgaggtagtcgctttg
tcatttgctaaggcgtggcaacaagtacaaagagtcagtgattcacagcaggcccaatcg
gctcaagtcgcccgagcaaaagggctcgaagaggctggtgaagacatggactggccatcg
ttacagctcactagcagttattccttactagaaaaacccttagctctggatgtggccgat
cttgggatcgatgcgacaagcttaccgccagctctgggtcagatgttaggggcactgccg
agtcagtttgccttttcagagcaagatatttttcgcactagcttaaaagccatgtggcct
atttataccggtggtcagatcaccgcggctcaagggatacataaggccaaagtggaggag
aaaaaacagcagcaggccttggcgacaagagagttatttcttcttctcgtgaatcgctat
tacggtgttgctgtcgctaaagctacggtggaaactaaccagaccttagtcgattcctta
gctgtgcatttagatcatgccactaagcgcgaacagcaagggcaaatcgccagagtcgaa
gtgctcaatgctgaagtggcatacaacaatggcaaaattaatttagccagcgcagttcgc
caatgggaaatggccaatattgctatggcacgtatgctaaagctgccttcggtaaattta
tattcggcacttttcatgctcgatgagtcgccttctttgccttatttgtcgcaactaacc
ctaacgcagcacccagcactaaaattacttcaagcgaaggaagctcaagcggaagggctg
attgatgtggaaaaaggcttgtataagcctaaggtgtttctgtacggtaactataccttg
tatgaagatgacagcactttatcccatattgagccagactggatggtaggtgttggcctg
actatgccgcttattagccgagacgggcgcagtggtaaggttcgggcggccaagagtgcg
ttgctgcaagctcgttatactaaggcacaaactcagcaagatctcagtttgctgctcgat
caaaactaccgtcaactgttacaggccgaggaagaaagtcagtccctcgataccagctta
gctttagcgaaggaaaacctacgattaagagacattgcctttaatcagggattatcgact
tccatagacagggttgatgctgaaatcaaactcaaagccgtgcacactcagcaattagct
gccaaatatcgctacctacaggcctatgcgagtctgatgacgataagtggtcagcttgat
aaatttattaataatagcaacagcttggagaaatga
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