Shewanella psychrophila: Sps_05107
Help
Entry
Sps_05107 CDS
T05063
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
spsw
Shewanella psychrophila
Pathway
spsw01501
beta-Lactam resistance
spsw01503
Cationic antimicrobial peptide (CAMP) resistance
spsw02020
Two-component system
spsw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
spsw00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Sps_05107
09132 Signal transduction
02020 Two-component system
Sps_05107
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sps_05107
01503 Cationic antimicrobial peptide (CAMP) resistance
Sps_05107
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsw02000
]
Sps_05107
02044 Secretion system [BR:
spsw02044
]
Sps_05107
01504 Antimicrobial resistance genes [BR:
spsw01504
]
Sps_05107
Transporters [BR:
spsw02000
]
Other transporters
Pores ion channels [TC:
1
]
Sps_05107
Secretion system [BR:
spsw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Sps_05107
RTX toxin transporter
Sps_05107
Multiple protein transporter
Sps_05107
RaxAB-RaxC type I secretion system protein
Sps_05107
Antimicrobial resistance genes [BR:
spsw01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Sps_05107
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Sps_05107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AQS40176
UniProt:
A0A1S6HX72
LinkDB
All DBs
Position
5768660..5770006
Genome browser
AA seq
448 aa
AA seq
DB search
MKFKIRTICAALSLTFSTAAVQADDLLQIYQQALTSDPIALQAQAQRDALYEKIEQNRAP
LLPTISANVGYNKNWINEDTVPNTDSSGINAGVTLKQVIYDHSAWVGLSLAELAASQADS
AYASSLQTLIIRVTSAYFAVLSAKDTYEFQGSEKRAIERQLEQTKQRFAVGLTAITDVHE
AQAQYDLARAQEILAENELTNSYEALREITGIEHNTINILDTERFSAVTPSPARATDWLK
MAETNSVDLLTTRIGKDIAQETISLYKAGHMSSLSLNAGYTTNIQQENSNSNESANDFDN
GTIGLTLSVPIFEGFKVSSQVNEAQYQYVEASEKMEQTHRKVVKDVRNNFNNVGASISSI
RAYEQSVISSESALKATQAGFEVGTRTIVDVLNRTRDLYDSKRKLSDARYGYINSILALK
QAAGTLNEDDVIAINNGLTAQVAQTTTQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaagatccgaacgatatgcgcggcactctcgctgacattcagtactgctgct
gtacaggccgacgatttactgcagatatatcaacaagcgctaaccagtgaccctatcgct
ctacaggctcaggctcaacgtgatgctctgtatgaaaagattgaacaaaatcgcgcacca
ctactgccaaccatcagtgcaaacgtaggctataacaaaaactggatcaatgaagataca
gtgcctaacacagactctagcggcataaatgctggcgtcaccttgaagcaggtcatctat
gatcacagtgcctgggtaggattgagcctggccgagctagccgcctctcaagccgactct
gcctacgcgtcgtcgctgcaaacgctgataatccgcgtaaccagtgcctacttcgcagtg
ctatcggcaaaagatacctacgagtttcagggctcagagaaacgtgccattgagcgtcaa
ctcgaacagactaaacaaaggttcgccgttggtttaaccgcaatcacagacgttcacgaa
gcccaggctcaatatgatttggctcgagctcaagagatcttagctgaaaatgagctgact
aatagctatgaggcactgcgtgagataactggcatagaacataatactatcaatatctta
gacactgagcgcttcagtgccgtcaccccctcaccagccagagcgactgattggcttaag
atggccgaaaccaacagtgtcgatctactaacgacccgcataggcaaagatattgctcag
gagaccatcagtctctataaagcgggtcatatgtcttcactgagccttaatgcaggttac
accaccaatatacagcaagagaacagtaacagtaatgagagtgcaaacgattttgacaac
ggcaccattggcctgaccttaagtgtacctattttcgaaggtttcaaggtcagttctcaa
gtcaatgaggctcaatatcagtacgtggaagcaagcgagaagatggaacaaactcaccgt
aaggtagttaaggatgttcgtaacaacttcaataacgttggcgcttcaattagctcaatc
cgtgcctatgaacaatcagttatctcatcagagagtgctctgaaagcgactcaggctggt
tttgaagtcggtactcgtaccatagtcgatgtacttaaccgtacgcgagatctatatgat
tctaagcgaaagctttctgatgctcgttatggctacatcaattcaatcctagcccttaaa
caagctgctggaaccttgaatgaagatgatgttatcgccatcaacaatggtttgaccgca
caagtggcacaaacaacgactcagtaa
DBGET
integrated database retrieval system
