Spirosoma radiotolerans: SD10_23900
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Entry
SD10_23900 CDS
T03819
Name
(GenBank) transporter
KO
K12340
outer membrane protein
Organism
srd
Spirosoma radiotolerans
Pathway
srd01501
beta-Lactam resistance
srd01503
Cationic antimicrobial peptide (CAMP) resistance
srd02020
Two-component system
srd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SD10_23900
09132 Signal transduction
02020 Two-component system
SD10_23900
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SD10_23900
01503 Cationic antimicrobial peptide (CAMP) resistance
SD10_23900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srd02000
]
SD10_23900
02044 Secretion system [BR:
srd02044
]
SD10_23900
01504 Antimicrobial resistance genes [BR:
srd01504
]
SD10_23900
Transporters [BR:
srd02000
]
Other transporters
Pores ion channels [TC:
1
]
SD10_23900
Secretion system [BR:
srd02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SD10_23900
RTX toxin transporter
SD10_23900
Multiple protein transporter
SD10_23900
RaxAB-RaxC type I secretion system protein
SD10_23900
Antimicrobial resistance genes [BR:
srd01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SD10_23900
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SD10_23900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
ACBP4_C
Zw10_N
DUF6319
DUF5743
Lectin_N
Lebercilin
Motif
Other DBs
NCBI-ProteinID:
AKD57480
UniProt:
A0A0E3ZY43
LinkDB
All DBs
Position
5888396..5889724
Genome browser
AA seq
442 aa
AA seq
DB search
MKPGLLTIPLLLAFAAVHAQNQPIQVPDDLRALVQQANTNYPTLKQQQQQIQAGEVRVDI
ARTAMRPNVNLNGNYTYVTPVPQFAIPINGQDVVAKLAPNNNVNANVSVGQTIYDFGRTD
AAIRQATDNVQILRRNFELTQQSLAYQVAAAYYGVGFLQRGLIVQDSVIRTATANVRLLS
TRLQNGDALQYDVLTEAVRVKAAQNRRIEIQNQLERQLAVLIYLTGNPQPETSRAIEQFQ
LGVQSGTVSLFDLNGQFQTAVAGNKAVLLAQDQVRAAETDVLVINRAGQPSITFSGTAGY
KNGYPLQVEKLRANTAAGINFIAPLYAGKRYKLQNQAAQLTLNASRYAVENASAQLRQSI
AQVNADIRSNQTRLANLETQVEQARKALQIANARLRNGVITNVELQSAETGVEEAELGRL
NFQYQLMLNQLELKRLLGENLF
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaggacttcttactataccattactgttagcatttgcggctgttcatgcacaa
aaccagccaatacaagtacccgacgatttgcgggcgctggttcagcaggctaataccaat
tatcccacgctgaaacagcagcaacaacagattcaggcgggcgaagtgcgggttgacatt
gcccgaaccgcaatgcgccctaatgtgaacctgaacggcaattacacctacgtaacgccc
gtaccccagtttgccattccaatcaatgggcaggatgtggtcgccaaactggctcctaac
aataacgtgaacgcaaacgtgtcggttgggcaaacgatttatgacttcggccgtacagac
gcggccattcggcaagccacggataatgtacagatcctgcgtcgaaatttcgaactaacc
cagcaatcactggcttatcaggtggcggctgcttactatggcgttggctttttacaacgt
ggcctgattgttcaggactcagttatcagaacagcaacggccaacgtcaggcttttatcg
acacgactacagaatggtgatgcacttcaatacgatgtactgacagaagccgtacgggta
aaagcagcgcagaaccgtagaattgagattcagaatcagttagagcggcaattggctgtc
ctgatttacctgacggggaacccacagccggaaacgagccgcgctattgagcaatttcag
cttggcgttcagtcaggaacggtatctctgtttgacctcaatggtcagtttcaaacggcc
gttgcgggcaacaaagctgtattattggcacaggatcaggttcgggcggctgaaacagac
gtattggttataaatcgggctggtcagccgagtattacgttcagtggtacggctggttat
aaaaacgggtatccgctccaggttgaaaaactacgggccaatacggctgctggcattaat
tttattgctccgctttatgctggcaagcgctacaaattacaaaatcaggccgctcaactt
acgttaaatgccagccgctacgctgttgagaatgccagtgctcagttacgtcagagcatc
gcccaggtcaatgccgacattagaagcaatcagactcggctggctaacctggaaacccag
gtagagcaggcccgcaaggcactccagattgccaacgcccgtctacgaaacggcgttatc
acaaatgttgaattacagagtgctgaaacgggtgtagaagaggctgagctcggccggcta
aacttccagtatcaactcatgcttaaccaactggaactgaaacgcttactgggcgaaaat
ttattttaa
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