Sediminicoccus rosea: LHU95_13820
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Entry
LHU95_13820 CDS
T08103
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
srf
Sediminicoccus rosea
Pathway
srf01501
beta-Lactam resistance
srf01503
Cationic antimicrobial peptide (CAMP) resistance
srf02020
Two-component system
srf03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LHU95_13820
09132 Signal transduction
02020 Two-component system
LHU95_13820
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LHU95_13820
01503 Cationic antimicrobial peptide (CAMP) resistance
LHU95_13820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_13820
02044 Secretion system [BR:
srf02044
]
LHU95_13820
01504 Antimicrobial resistance genes [BR:
srf01504
]
LHU95_13820
Transporters [BR:
srf02000
]
Other transporters
Pores ion channels [TC:
1
]
LHU95_13820
Secretion system [BR:
srf02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LHU95_13820
RTX toxin transporter
LHU95_13820
Multiple protein transporter
LHU95_13820
RaxAB-RaxC type I secretion system protein
LHU95_13820
Antimicrobial resistance genes [BR:
srf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
LHU95_13820
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
LHU95_13820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
ARM_TT21_5th
Packaging_FI
Motif
Other DBs
NCBI-ProteinID:
UPY35303
UniProt:
A0A9E7A3H2
LinkDB
All DBs
Position
2937296..2938792
Genome browser
AA seq
498 aa
AA seq
DB search
MKGGVAILAAMLALGAGPALAQREAAAPRERPAPRANTTMPSTHMPEGSIPLTLPEAVFL
ALRSNRAIRSQYLQRVADRFSLRVTEATFDPRFGVSGGITRSRTGNTNLTQTTLGPVVNI
ATPTGAQFQFGWLGVQSNARGASPSGQARATFQVIQPLLAGGGIDYAMAPIRIGRIQEVN
SQLQLKSLVIDQISQTIAGYRTLLQAQEQLRISIEALRRARELASVNQALFAAGRLAQVE
LIQAETSIAQQELALLGARNQHAAARLALLTLLAVNQNQMIWAVERPAAQSARVDPARAL
ATAAANQPEYLRTLLAVEVNRINLDVARNQRLWDVSVVAGTGLAAQRAEIARTLGALAEV
RNDFNIGLQFNIPIGQIAREQPEVNATIALRQSELAIEQARDRLRQLVEDTTRNIDTLRR
QAELARRARELAGLQLEAELIKLQAGRSSNFQVVSFQGSLQSAESAELAAVIAYANALTQ
LDQVLGTTLDTWRISLND
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaagggaggtgttgcgatccttgccgcgatgctggcccttggcgctggcccggccctc
gcgcagcgtgaagcggccgcaccgcgcgagcgcccggcgccgcgcgccaacaccaccatg
ccctcgacccatatgcccgagggcagcatcccgctgaccctgcccgaggccgtgtttctc
gcgctgcgcagcaaccgcgccatccgcagccagtatctgcagcgcgtggcggaccggttt
tcgctgcgcgtgaccgaggccacctttgatccgcgcttcggcgtcagtggcggcatcacg
cgctcacgcacgggcaacaccaacctcacgcagaccacgctgggccccgtggtgaacatc
gcgacgcccacgggcgcgcaattccagttcggctggctcggcgtgcagagcaatgcgcgg
ggtgcgtcccccagcggccaggcgcgcgcgaccttccaggtgatccagccgctgctggcc
ggcggcggcatcgattacgccatggcccccatccgcatcggccgcatccaggaggtgaac
agccagctccagctgaaatccctggtgattgaccagatcagccagaccatcgcgggctat
cgcacgctgctccaggcgcaggagcagctgcgcatctcgatcgaggcgctgcgccgcgca
cgcgaactggccagcgtgaaccaggcgctcttcgccgcggggcgcctcgcacaggtcgaa
ctcatccaggccgagaccagcatcgcgcagcaggagctggcgctgctcggcgcgcgcaac
cagcatgcggcagcgcggctggccttgctgacgctgctggcggtgaaccagaaccagatg
atctgggcggtggaacgcccggccgcccaatccgcccgcgtggaccccgcgcgcgccctg
gccaccgccgccgccaaccagcccgaatatctgcgcacgctgctggcggtggaggtgaac
cgcatcaacctcgatgtcgcgcgcaatcagcggctttgggatgtctcggtggtggcgggc
acggggctggcggcgcagcgggccgagatcgcacgcacgctcggcgccctggccgaggtg
cgcaatgatttcaacatcgggctgcaattcaacatccccatcggccagatcgcgcgcgaa
cagcccgaggtgaatgccaccatcgcgctgcgccaatccgaactcgccatcgaacaggcg
cgcgaccggctgcgccagttggtcgaggatacgacgcgcaacattgatacgctgcgccgc
caggccgagctcgcgcgccgcgcgcgtgaacttgccgggctccagctggaggcggagctg
atcaagctgcaggccgggcgttcctccaacttccaggtggtctccttccagggctcgctg
caatcggccgagagtgctgagctggcggccgtcatcgcctatgccaatgcgctgacccag
ctggaccaggtgctgggcaccacgctggacacctggcggatctcgctgaatgactga
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integrated database retrieval system
