Sediminicoccus rosea: LHU95_21170
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Entry
LHU95_21170 CDS
T08103
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
srf
Sediminicoccus rosea
Pathway
srf01501
beta-Lactam resistance
srf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LHU95_21170
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LHU95_21170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srf02000
]
LHU95_21170
01504 Antimicrobial resistance genes [BR:
srf01504
]
LHU95_21170
Transporters [BR:
srf02000
]
Other transporters
Pores ion channels [TC:
1
]
LHU95_21170
Antimicrobial resistance genes [BR:
srf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LHU95_21170
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LHU95_21170
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LHU95_21170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UPY36707
UniProt:
A0A9E7D0H4
LinkDB
All DBs
Position
4433439..4434848
Genome browser
AA seq
469 aa
AA seq
DB search
MSPRRMFLLPALLALAGCSTFRPDPASGVALPAQFSAASADAANWPDPAWWSGFGSPELD
ALMQQAVTANFDIRAAVARVRQADAQIRITGQALLPSGNLTGTVTHSQTPLSTATAVNLN
GAAARGRFTHRTLYATGLQAAYEIDFWGKNRAALVAAQQNLQATRFDVGAITLTTEASVA
NTYFQILASREQLAIQQQNLTAAERVLAILQQRANAGTSTGLDIATQQTLVEQQRAAVPP
LRQSVQQNTYSLGTLTGQVPEAVPVPRLSLGDVRVPPVQPGLPSEVLQRRPDVGLAEATL
ASAQASVEQARTAMFPSVTLSAQGGFQNLALENLLRPGSSLFSLVGGLTQPIFQLGQLRA
QYRLTQAQAEELLENYRAAIVAALVDVENAIVALRETTEQETLQAAATRSAERAYAISEA
QLRAGTIDLLALLITQQTLFNARNNLAQVRLARLQAAVGLFRALGGGWS
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccccgacgcatgttcctgctcccggccctcctggcgctggctggctgttcgacg
ttccgccccgatccggcttcaggggttgccctgccggcgcagttcagcgccgcttccgct
gacgccgcaaattggcctgatcccgcctggtggagcggcttcggctcgcccgagctggat
gcgctgatgcaacaggctgtgacggccaattttgacatccgcgccgcggttgcacgggtg
cgccaagcggatgcgcaaatccgcatcaccggccaggccctgctgcccagcggcaacctc
accggcaccgtcacgcacagccagacgccgctttccaccgcgacagccgtcaacctcaac
ggggcggcggcgcgcggccgcttcacccatcgcaccttgtatgcgacgggcctccaggcc
gcctatgagatcgatttctggggcaaaaatcgcgcggccctcgtggccgcccagcagaat
ctccaggccacgcgcttcgatgtcggcgccatcacgctcaccaccgaggcctcggtggcc
aatacctatttccagatcctggcctcgcgcgagcaactggcgatccagcagcagaatttg
acggcggcggagcgggtgctggccatcctgcagcagcgcgcaaacgccggcaccagcacg
ggcctcgacatcgcgacgcagcagacgctggtggagcagcagcgcgccgccgtcccgccg
ctgcggcaatccgtccagcagaacacctattcgctcggcacgctgaccggtcaggtgccc
gaggcggtgccggtgccgcgcctcagccttggcgatgtgcgcgtgccgccggtgcagccc
ggcttgccgtcggaggtgttgcagcgccggcccgatgtcggtctggcggaagcgacactg
gcatcggcccaggccagcgtcgagcaggcgcggacggcgatgttcccctccgtcacgctc
agcgcgcagggcggcttccagaacctggcgctggaaaacctgctgcggccggggtcgtcg
ctgttttcgctggtgggcgggctgacgcaacccatcttccagctgggccagcttcgcgcc
caataccggctgacccaggcccaggccgaagagctgctggagaactaccgggcggcgatc
gtcgccgcgctggtggatgtggagaatgccatcgtggcgctgcgcgaaaccaccgagcag
gaaaccctgcaagccgccgcgacccgcagcgccgagcgcgcctatgccatctccgaggcg
cagttgcgcgccggcacgattgatcttctcgcgctgctgatcacccagcagacgctgttc
aacgctcgcaacaatctcgcccaggtgcgcctggcgcggctgcaggccgctgtcggcctg
tttcgcgcgctcggcggcggctggagctga
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