Spirosoma rhododendri: HH216_04300
Help
Entry
HH216_04300 CDS
T08048
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
srho
Spirosoma rhododendri
Pathway
srho01501
beta-Lactam resistance
srho01503
Cationic antimicrobial peptide (CAMP) resistance
srho02020
Two-component system
srho03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HH216_04300
09132 Signal transduction
02020 Two-component system
HH216_04300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH216_04300
01503 Cationic antimicrobial peptide (CAMP) resistance
HH216_04300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_04300
02044 Secretion system [BR:
srho02044
]
HH216_04300
01504 Antimicrobial resistance genes [BR:
srho01504
]
HH216_04300
Transporters [BR:
srho02000
]
Other transporters
Pores ion channels [TC:
1
]
HH216_04300
Secretion system [BR:
srho02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HH216_04300
RTX toxin transporter
HH216_04300
Multiple protein transporter
HH216_04300
RaxAB-RaxC type I secretion system protein
HH216_04300
Antimicrobial resistance genes [BR:
srho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HH216_04300
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HH216_04300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QJD81243
UniProt:
A0A7L5DV64
LinkDB
All DBs
Position
complement(1097809..1099143)
Genome browser
AA seq
444 aa
AA seq
DB search
MAPTGLTPAGGTGNGPSFTLQQAIDHALQQNINVKNSVLDGVSAEGRIREVKASALPQVA
GSASLTDNLIIQRAFLPANFFDPTASPDAPAVPVQFGVKYSGNATLSLNQVIYSPGLNVG
LRAAATYRELAQRNLQGTKVTVAEQVAKAYYGVLVALERAKLLDYNIGRLDTLMNETRAM
NKQGFVEKLDVQRLDVQANNLRAERQNVQNLIELSYTLLKFQMGMGVNDEITLAEQLQDR
SVDDLRPLISPDPTFRYTSRIEYSTLETQIKLAEQDVELTQKGYYPTLAGFVNYGYNSGR
NAIGQLVTAPWLNFATLGLSLQVPIFDGFQKRYQIAQKRVTLQKAQNSGALLRNSIDLQI
RQASITLNNGLQTLQTQQRNRELAQEIVRVSRIKYKEGVGSSIEVLNAETALREAQTNYF
ASLYDFLIAKVDQDRALGRLYIGL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
ctggcaccgacaggactgacgcctgcgggcggaacgggtaatggtccgtcgtttacgctg
caacaggccattgatcacgcgcttcagcagaacatcaatgtaaaaaacagtgtactcgac
ggcgtcagcgcagaggggcgcatccgggaagtgaaagcgtcggccctgccgcaggtggcg
gggagcgcgtcgctgacagacaacctgattatccagcgcgcgtttctacccgctaatttc
ttcgacccaaccgcatcgcccgatgcgcccgccgtgccggtgcagtttggcgtgaagtat
tcgggaaatgccacgctgagcctgaatcaggttatctacagtccgggcctgaacgttggt
ctgcgggcggctgccacttaccgcgaactggcgcagcgcaacctgcaaggcaccaaagtg
acggtggctgagcaggtcgcgaaggcgtattacggggtgctggtggcgctggagcgggcc
aagctgctcgactacaacattgggcggctggatacgctgatgaacgaaacccgcgccatg
aataagcagggattcgtggagaagctggacgtgcagcggctcgacgtgcaggccaacaac
ctgcgggccgagcggcagaacgtgcagaacctgatcgagctgagctatacgctgctcaaa
ttccagatgggcatgggcgtcaacgacgagatcaccctggcggagcagttgcaggaccgg
tcggtggatgacctgcgcccgctgatttcgcccgacccgacgttcaggtacacgagccgg
atcgagtattcgacgctggaaacgcagattaaactcgccgagcaggatgtcgaactgacg
cagaaaggctactatccgacgctggctggttttgttaactacggttacaacagcgggcgt
aatgctatcggtcagctcgttacggccccctggctcaactttgctacgctggggctgagt
ttgcaggtgcccattttcgacggttttcaaaagcgctaccagatcgcccaaaagcgggtg
acgctccagaaagctcagaacagcggtgccctgcttcgcaactccatcgacctgcaaatc
cggcaggccagcatcacgctcaataacggcctgcaaacgctgcaaacccagcagcgcaac
cgcgaactggcgcaggagattgtgcgggtgtcgcgcatcaagtacaaagagggtgtcggg
tcgagcatcgaagtgctgaacgccgaaaccgcccttcgtgaagcgcagaccaactatttc
gcgtcgctgtacgattttctgatcgccaaagtcgaccaggatcgcgccctcggacggctc
tacattggattataa
DBGET
integrated database retrieval system