Spirosoma rhododendri: HH216_19525
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Entry
HH216_19525 CDS
T08048
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
srho
Spirosoma rhododendri
Pathway
srho01501
beta-Lactam resistance
srho01503
Cationic antimicrobial peptide (CAMP) resistance
srho02020
Two-component system
srho03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HH216_19525
09132 Signal transduction
02020 Two-component system
HH216_19525
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH216_19525
01503 Cationic antimicrobial peptide (CAMP) resistance
HH216_19525
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_19525
02044 Secretion system [BR:
srho02044
]
HH216_19525
01504 Antimicrobial resistance genes [BR:
srho01504
]
HH216_19525
Transporters [BR:
srho02000
]
Other transporters
Pores ion channels [TC:
1
]
HH216_19525
Secretion system [BR:
srho02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HH216_19525
RTX toxin transporter
HH216_19525
Multiple protein transporter
HH216_19525
RaxAB-RaxC type I secretion system protein
HH216_19525
Antimicrobial resistance genes [BR:
srho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HH216_19525
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HH216_19525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TNT
Motif
Other DBs
NCBI-ProteinID:
QJD80372
UniProt:
A0A7L5DRY7
LinkDB
All DBs
Position
4691891..4693219
Genome browser
AA seq
442 aa
AA seq
DB search
MKQYVIGAGLWLTLLGGAIAQPSPAVMPLDKAIQTALQNNKGIRLADTRTLAAEARSQEA
KDRSLPTATAQLAYSRYSLTGPFAFGEGSDGKPLFGIPAGAFNATIGGATISKEIFGGFA
EKSAEKSAELLAKASRLDAQRNRSELVYTVTDAYYNIVKLIRSTTVIEQNIRQFDERERE
ARNLEKEGVVTANEVLKIQLQKNNLNLSRLQVDKARQTALYNFNLLLGLPDDQSVAVDTT
LANPAAVTQQLSTFLTQAQQTRPETEANSLRVQSAQEQLRNTKSGMYPHFGVSAGYNYIN
PSARLIPQASSFVSAWNVGAGLSYNIGSLYNMKGRLNTAKNSIDQATIQSQQQADQIRSE
VVTAYNNYQLALEQQSVIRTAVGQAQENYRLTESRFRNGLVGSTDLLEADSFLLQAQLNV
INATVDAQLAYQRLLKATGTNL
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagtacgtaattggagccggtttgtggcttacgctgctgggtggtgccatcgcc
cagcccagcccggcggtgatgccgctcgacaaagccattcagaccgctctgcaaaacaac
aagggtatccggctggccgacacccgcacgctggcggccgaagcccggtcgcaggaagcc
aaagaccggagcctgcccacggcaacggcgcagctggcttattcgcgctacagcctgacg
ggtccgtttgctttcggcgaaggcagcgacggcaaaccgctattcggcatcccggcgggg
gccttcaacgccaccatcgggggcgctacgatcagcaaggaaatcttcggcggcttcgcg
gaaaagtcggcagagaaatcggccgaactactcgccaaagccagtcggctcgacgcgcag
cgtaaccgttcggaactggtttataccgtcacggacgcgtactacaacatcgtcaagctg
attcggtcaacgacggtcatcgagcagaacatcaggcagttcgacgagcgcgaacgcgaa
gcccggaatctggaaaaagaaggcgtcgtgacggccaatgaggtactgaagattcagttg
cagaaaaataacctcaacctgagccgcctgcaagtcgacaaggcccggcaaacggcccta
tataacttcaacctgctgcttggcctccccgacgatcagtccgttgcggtcgacacgacg
ctggctaatccggcggctgttacgcagcaactgagtacgtttctgacgcaggcgcaacag
acccggcccgaaacggaagccaattcgctgcgggtacagtcggcacaggagcagctacgc
aacacgaaaagcggtatgtatccgcacttcggggtatcggcaggctacaactacatcaac
ccgtcggcccggctgattccgcaggccagctcgtttgtcagtgcctggaacgtgggggct
ggactgagctacaacatcggttcgctctacaacatgaagggtcgcctgaatacggccaaa
aatagcatcgatcaggccacgatccagagtcagcagcaggccgatcagattcgctccgaa
gtcgtgacggcctataacaactaccagcttgccctcgaacagcagagcgtaatccgcacg
gcggttgggcaggcgcaggaaaactaccgcctgacggaatcgcgcttccgcaacgggctg
gttggctcaaccgacctgctcgaagccgacagcttcctcttacaggctcaattaaatgtc
atcaacgccaccgtcgacgcccagctcgcttaccagcgactcctgaaagccacggggaca
aatctataa
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