Spirosoma rhododendri: HH216_23470
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Entry
HH216_23470 CDS
T08048
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
srho
Spirosoma rhododendri
Pathway
srho01501
beta-Lactam resistance
srho01503
Cationic antimicrobial peptide (CAMP) resistance
srho02020
Two-component system
srho03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HH216_23470
09132 Signal transduction
02020 Two-component system
HH216_23470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH216_23470
01503 Cationic antimicrobial peptide (CAMP) resistance
HH216_23470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_23470
02044 Secretion system [BR:
srho02044
]
HH216_23470
01504 Antimicrobial resistance genes [BR:
srho01504
]
HH216_23470
Transporters [BR:
srho02000
]
Other transporters
Pores ion channels [TC:
1
]
HH216_23470
Secretion system [BR:
srho02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HH216_23470
RTX toxin transporter
HH216_23470
Multiple protein transporter
HH216_23470
RaxAB-RaxC type I secretion system protein
HH216_23470
Antimicrobial resistance genes [BR:
srho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HH216_23470
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HH216_23470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QJD81052
UniProt:
A0A7L5DTV7
LinkDB
All DBs
Position
5581742..5583190
Genome browser
AA seq
482 aa
AA seq
DB search
MKFVVYSLLLTGWLGAAYAQAPADATTPAAVTMTLDQCIALAIDNQPSIRQAQLQQQIAD
NTVEQTRKSQLPVVSSFTNQGQNFGRNVDPYTNSIVNSQIATNTMGLGANWTVFNGFQLK
NTIVQQSLTAQASQYDLAAAKNAVTFNALLAYLQVLTAQDLDRASEMQVAVSQSLVERTE
KLVKAGTTAPYNGYDARSQLASDQIQRVQTQTNLKTAVLTLLQVLNLPATTHLSLVRVSD
TGTVAPASIANAYQVYTQARTFMPDVLAADLRTKASQLGLKLAKGLAYPTVTLNANWGTS
YSSAARRSVMTGDMVEQTTTGFVDVSGQSYPVRVLTPVTGTEGITYFQQLGNNQYKSLTL
SIRVPILNGFQVRYRTTNARLQQQLSESQAESTRRNLRQAIDQAVAQQQNAYERYTALSE
QVATLTQSFHAAEARYNAGLLPAVDYNLAKSNLDKATINLIQVRYETILRDKIVHFYQSG
TL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcgtcgtctactccctcctcctgacgggctggctcggcgcagcctacgcccag
gcaccggccgacgccacgacgcccgcagccgttaccatgacgctggatcaatgcattgcg
ctggctatcgacaatcagccgtcgatccggcaggctcagcttcagcagcaaatcgctgac
aataccgttgaacagacgcggaaaagccagttgcccgtcgtatcgtcgttcacgaatcag
gggcaaaattttgggcgaaacgtcgatccatataccaactcgattgtcaactcgcagatc
gccaccaacacaatggggctgggtgccaactggacggtattcaacggttttcaactgaaa
aacacgattgtgcagcaaagcctgaccgcgcaggccagccaatacgatctggcagccgcc
aaaaacgcggtgacgttcaatgcgctgctggcgtacctacaagtgctgaccgcgcaggac
ctcgaccgggccagtgagatgcaggtagccgtgtcgcagtcactggtcgagcggacggaa
aagctggtgaaagcgggcacgacagccccgtacaacggctacgacgcccggagccaactg
gcaagtgatcagattcagcgcgtacagacgcagaccaacctgaaaacggccgtgctaacg
ctgcttcaggtgctgaacctacccgccacgacgcatctatctctcgtccgcgtcagcgat
accggcaccgttgccccggcatcgatagccaacgcctatcaggtctacacccaggcccga
acgtttatgcccgacgtgctagctgccgacttgcgtaccaaagcaagtcagctgggcctc
aaactggcgaagggactagcgtacccaaccgttacgctgaacgccaactggggaacgtct
tattccagcgcggcccggcgcagtgtgatgactggcgacatggtcgagcaaaccacgact
ggctttgtcgacgtatcggggcaatcgtatccggtgcgtgtgctgacgcccgtaaccggc
acggaaggcattacgtattttcagcaactgggtaacaaccagtacaaaagtctgacgctc
agcatccgcgttccgatcctgaacggctttcaggttcgctaccgcacaaccaacgcccgg
ttgcaacagcagttgtcagaatcgcaggctgaaagcacacggcggaacttgcggcaagct
atcgatcaggcagtcgcgcagcagcagaacgcctacgaacgctacacagccctatcggag
caggtcgccacgttgacgcagtcgtttcacgcggcagaagctcgttacaacgctggctta
ctccccgccgtcgactataacctggcaaagagtaacctcgacaaagccacgatcaacctg
attcaagtgcgctacgagaccatcctccgcgacaaaatcgtacacttctaccagagcggt
acgttgtga
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