Spirosoma rhododendri: HH216_24270
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Entry
HH216_24270 CDS
T08048
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
srho
Spirosoma rhododendri
Pathway
srho01501
beta-Lactam resistance
srho01503
Cationic antimicrobial peptide (CAMP) resistance
srho02020
Two-component system
srho03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srho00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HH216_24270
09132 Signal transduction
02020 Two-component system
HH216_24270
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HH216_24270
01503 Cationic antimicrobial peptide (CAMP) resistance
HH216_24270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srho02000
]
HH216_24270
02044 Secretion system [BR:
srho02044
]
HH216_24270
01504 Antimicrobial resistance genes [BR:
srho01504
]
HH216_24270
Transporters [BR:
srho02000
]
Other transporters
Pores ion channels [TC:
1
]
HH216_24270
Secretion system [BR:
srho02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HH216_24270
RTX toxin transporter
HH216_24270
Multiple protein transporter
HH216_24270
RaxAB-RaxC type I secretion system protein
HH216_24270
Antimicrobial resistance genes [BR:
srho01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HH216_24270
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HH216_24270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QJD81190
UniProt:
A0A7L5E0A9
LinkDB
All DBs
Position
complement(5758936..5760324)
Genome browser
AA seq
462 aa
AA seq
DB search
MKFGSCFLFLLLPTALLAQQTDNAVQRARQRAFTVATIPQTGDPLTLAQAASQAIDVNYQ
IRINKSQEQIARNNFTRGNAGYLPSLTGNLNSNGGLQSFYQTYLDGLRPPQEANGIFNRT
SNLGLNLNYTVFNGYARSATYNQLQQLLKLASVTTRANAEATLASVATTYYDVIRQLQRL
IAFSQALDVSRERLDLARATYEVGTRSKVDFLSAQVDYNADSAAVIQQEQFLRDAKVTLN
SLLVRDPQTEFAIRDTILVNSNLQFPALEESLASNNPLLATAVLNRTITDINIRLANAQQ
LPLVTAQTGYNYQFVDNQGGFGIRTGRTSALTYLLTATIPIFNGFNLKRQIQNARVNTLI
ARDQENNQRLQLQTALTQTYQLYRNSLKLLNLEVLNNQLASQNVDIAYDRYRIGNSTFVE
FRDVQRTQIDAQTRLIDAEYNAKAAEIELLRLSSTISQTLVQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcggtagttgctttctattcctgctccttcctactgcactgcttgcgcaacaa
actgataacgccgttcagcgcgcccgacaacgggcttttacggtggcgactattccgcaa
acgggcgacccgctgacgctggcacaggccgccagtcaggcgatcgacgtcaactaccag
attcgtatcaacaagtcgcaggagcagattgcccgcaacaattttacgcggggcaatgct
ggttatctgccttcgttgacgggtaatctcaactccaacggggggttacagagcttttac
cagacctacctcgacgggttgcgacccccgcaggaagccaacggtatcttcaaccggacc
agcaacctcggccttaacctcaactacactgtcttcaatggctatgcccggtcggccacg
tacaaccagctgcaacaactgctcaaactcgccagcgtaacgacccgcgccaacgccgaa
gcaaccctcgccagcgtcgccacgacctattatgacgtgatccggcagttgcagcggctg
atcgcgttcagccaggcactcgacgtgtcgcgcgaacggcttgacctggcccgcgccacc
tatgaagtcggtacgcgctcgaaagttgattttttgagcgcgcaggtcgattacaacgcc
gacagtgccgccgtgatccagcaggagcagtttctgcgcgacgccaaagtcacgctcaac
tcgctgctcgtacgcgacccccaaaccgagtttgccattcgcgacacgattctggttaat
agcaatttgcagtttccggcactggaagaatcattggcgagtaacaatcccctgctggcc
acggcggtgctcaatcgaaccatcaccgacattaatattcggctggccaatgcccagcaa
ctgccgctggtaacggcgcagacggggtacaactaccagtttgtggacaaccagggcggc
tttggtatccgcaccggtcggactagtgccctgacgtatttgctgacggcgaccatcccg
attttcaacggatttaacctgaaacggcagattcagaatgcccgggtgaatacgctcatt
gcccgcgatcaggaaaataaccagcggctgcaactgcaaacggcactgacgcagacgtac
caactctaccggaacagcctcaagctgctgaatctggaagtactcaacaaccagctggcg
agtcagaacgtcgatattgcgtacgatcgctatcggattggtaactcgacgttcgtggaa
tttcgcgatgtgcagcgcacccagatcgacgcgcaaacccgcctgatcgatgccgaatac
aacgctaaagcggcagaaatcgaattattgcggctgagcagcactatctcgcagaccctg
gtgcagtag
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