Serratia plymuthica 4Rx13: SOD_c40300
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Entry
SOD_c40300 CDS
T02710
Symbol
fdhF
Name
(GenBank) formate dehydrogenase H
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl00680
Methane metabolism
srl00720
Other carbon fixation pathways
srl01100
Metabolic pathways
srl01120
Microbial metabolism in diverse environments
srl01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
SOD_c40300 (fdhF)
00680 Methane metabolism
SOD_c40300 (fdhF)
Enzymes [BR:
srl01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
SOD_c40300 (fdhF)
1.17.98.5 hydrogen-dependent carbon dioxide reductase
SOD_c40300 (fdhF)
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
PLD_C
Zn_ribbon_HMPTM
Motif
Other DBs
NCBI-ProteinID:
AGO56980
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Position
4544728..4546884
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AA seq
718 aa
AA seq
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MKKITTVCPYCGAGCKMKLVVDNGKILRAEAADGATNQGELCLKGYYGWDFLNDTKLLTP
RLTQPLIRREKGGKFEAVSWDEAIRYTAQRLKAIKQQHGARAIMHTGSSRGTGNETNYVM
QKFARAVIGNNNVDCCARVCHGPSVAGLQATLGNGAMSNSIGDIENSKCLLIIGYNCADS
HPIVARRVLKAKEKGAQIVVCDPRRIETARIADQHLQINNGCNMALVNAFGHVLIEENLY
DRDYVAKYTEGFDAYRQQVADYAPETVEQLTGVSAQQIRQAMRTYASAPSATIMWGMGVT
QFGQAVDVVKGLASLALLTGNLGRANVGVGPVRGQNNVQGACDMGVLPNEFPGYQSVTDP
AVRAKFAAAWGIDAAGMDPDIGYRITEVPHLVHEGKVKAYYIMGEDPLQTEADLSLVRSA
FDALEFIVVQDIFMTKTAEQADVILPSTSWGEHGGVFSCADRGFQRFEKAIEPQYNVKRD
WEIISLLATELGYPMHYEDNQQIWDEMRELCPLFYGATYEKMGELGHVQWPCTTLDSPGT
PYLYQGNQFTTPSGKGQLFATTWRAPAEVPDAAYPLVLCTVREVGHYSCRSMTGNCAALQ
TLADEPGFVQINPQDAAALGIGDQQLVWVASRRGKVISRANYNERINLGAVYMTYQWWIG
ACNELTQENLDPISKTPETKYCAVKLEAIGDQNWAENYASQSYSDMKARLRRAVEDVM
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcacgaccgtctgcccttactgtggcgcaggctgcaaaatgaaactggtg
gtggataacggtaaaatccttcgcgcagaagccgccgacggcgcaaccaaccagggcgaa
ctgtgcctgaagggctactacggctgggacttcctcaacgataccaagctgctgacgccg
cgcctgacgcaaccgctgatccgccgtgaaaaaggcggcaagtttgaagcggtcagttgg
gacgaagccatccgctacaccgcgcagcggctgaaagccatcaagcagcaacacggcgca
cgcgccattatgcacaccggctcctcacgcggtaccggcaacgaaaccaactatgtgatg
cagaagttcgcccgcgcggtgatcggcaacaataacgtcgactgctgcgcccgcgtctgt
cacggcccgtcggtagccggtttgcaagccacgctgggcaacggcgcgatgagcaactcg
atcggcgatatcgaaaactccaaatgtttactgatcatcggctacaactgcgccgactcg
cacccgatcgtcgcccgtcgggtcctgaaagccaaagagaaaggcgcgcaaatcgtggtc
tgcgatccgcgccgtattgaaaccgcacgcatcgccgatcagcatctgcaaatcaacaac
ggctgcaatatggcgctggttaacgccttcggccacgtgctgatcgaagaaaacctgtat
gaccgcgattatgtggcgaaatacaccgaaggcttcgacgcctatcgccagcaagtggcc
gattacgcgccggaaacggtggaacagctgaccggcgtcagcgcccagcaaatccgtcag
gcgatgcgcacctacgccagcgccccttccgccaccatcatgtggggcatgggcgtcacc
cagttcggccaggcggtggatgtggtcaaagggctggccagcctggcgctgttgaccggc
aacctcgggcgcgccaacgtcggcgtaggcccggtgcgcggccagaacaacgtccagggc
gcctgcgacatgggcgtgctgccaaacgaattccccggttatcaatccgttactgacccc
gcagtccgcgccaaattcgccgccgcctggggcattgacgccgccggaatggatccggat
atcggttatcgcatcactgaagtgccgcacctggtgcacgaaggcaaagtgaaagcctat
tacatcatgggggaagatccgttacagaccgaagccgatctcagcctggtgcgcagcgct
ttcgatgcgcttgagtttatcgtggtgcaagacatcttcatgaccaaaaccgccgaacaa
gcggacgtgatcctgccatccacctcctggggtgagcacggcggcgtgttctcgtgcgcc
gatcgcggtttccagcgtttcgaaaaagccatcgaaccgcagtacaacgtcaagcgcgac
tgggaaatcatcagcctgctggcgaccgaactgggctatccgatgcattacgaagacaac
cagcaaatctgggatgaaatgcgcgagctgtgcccgctgttttacggcgcaacctacgaa
aaaatgggcgaactcggccacgtccaatggccctgcaccacgctcgacagcccaggcacg
ccgtatttgtatcagggcaatcaattcaccaccccgtccggcaaggggcagttgttcgcc
accacctggcgcgccccggccgaagtgccggacgccgcttatccgctggtgctgtgtacg
gtgcgtgaggtcggccactactcctgccgctcgatgaccggtaactgcgccgccttgcaa
accctggcggacgaaccgggcttcgtgcaaatcaacccgcaggacgccgccgccctgggc
attggcgatcagcagctggtgtgggtcgcctcgcggcgcggcaaggtgatctcccgcgcc
aactacaacgaacgcattaacctgggcgcggtgtacatgacctatcagtggtggattggc
gcctgcaatgaattgacgcaggaaaacctcgatccgatatccaaaactccggaaaccaag
tactgcgcggtcaagctcgaagcgattggcgatcaaaactgggcggaaaactacgccagc
caaagctacagcgatatgaaagcccgcctgcgcagggcggtggaagacgtgatgtga
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