Serratia plymuthica 4Rx13: SOD_c40820
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Entry
SOD_c40820 CDS
T02710
Symbol
tolC
Name
(GenBank) outer membrane protein TolC
KO
K12340
outer membrane protein
Organism
srl
Serratia plymuthica 4Rx13
Pathway
srl01501
beta-Lactam resistance
srl01503
Cationic antimicrobial peptide (CAMP) resistance
srl02020
Two-component system
srl03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
srl00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SOD_c40820 (tolC)
09132 Signal transduction
02020 Two-component system
SOD_c40820 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SOD_c40820 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
SOD_c40820 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srl02000
]
SOD_c40820 (tolC)
02044 Secretion system [BR:
srl02044
]
SOD_c40820 (tolC)
01504 Antimicrobial resistance genes [BR:
srl01504
]
SOD_c40820 (tolC)
Transporters [BR:
srl02000
]
Other transporters
Pores ion channels [TC:
1
]
SOD_c40820 (tolC)
Secretion system [BR:
srl02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SOD_c40820 (tolC)
RTX toxin transporter
SOD_c40820 (tolC)
Multiple protein transporter
SOD_c40820 (tolC)
RaxAB-RaxC type I secretion system protein
SOD_c40820 (tolC)
Antimicrobial resistance genes [BR:
srl01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SOD_c40820 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SOD_c40820 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
RIC1
Motif
Other DBs
NCBI-ProteinID:
AGO57032
LinkDB
All DBs
Position
4611650..4613152
Genome browser
AA seq
500 aa
AA seq
DB search
MKKLLPLLIGLSLSGFSAMSQAENLLQVYKQARESNPDLRKTAADRDAAFEKINEARSPL
LPQLGLSAGYNRSYGYRDNRDQNGNTTSGSLALTQTIFDMSKWRALTLQEKTAGISDVTF
QTSSQQLILDTATAYFNVLSAIDSLSYTQAQKQAVYRTLDQTTQRFNVGLVAITDVQNAR
SNYDTVLASEVTARNTLDNALEKLRQVTGTFYPELASLNTDRFSTQRPEAVNNLLKEAEA
RNLSLLSARLSQDLAREQIKSAQTGYMPTVDFSASTAVSNNRYSGSRSISTDNDAGENKV
GLSFNLPLYSGGQTNSQVQQAQYNFVGASEQLESAHRSVVQTVRSSFNNVNASISSINAY
KQAVISAQSSLDAMEAGYQVGTRTIVDVLDATTTLYNAKQQLSSARYTYLINQLNIKSAL
GTLNENDLLLLNGALGKPISTSQDVVAPPTTAQDAYAEGYNGNAPAPQTAAPAPVATRAS
APAITTTQPARSNSGNPFRN
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaactgctcccccttcttatcggactgagcctgagcggcttcagtgcaatgagc
caggcagagaacctgctgcaggtttacaaacaggccagggaaagtaatccggatctgcgc
aagactgccgctgaccgtgacgccgcattcgaaaaaatcaacgaagcgcgcagcccgctg
ctgccgcagttgggtttgagcgccggttataaccgtagctatggctatcgtgacaatcgc
gaccaaaacggcaataccaccagcggctcgctggcgctgactcaaaccattttcgacatg
tcgaaatggcgcgcgctgacgctgcaggaaaaaaccgccggtatctccgacgtgaccttc
cagacctcgtcgcaacagctgatcctcgacaccgccaccgcctatttcaacgtgctgagc
gccatcgactcgctgtcttatacgcaggcgcaaaaacaggcggtttaccgcacgctggat
caaaccacccaacgctttaacgtgggtctggtggcgatcaccgacgtgcagaacgcccgt
tccaactacgacaccgtgctggcgtccgaagtgaccgctcgcaacaccctggataacgcg
ctggaaaaactgcgccaggtgaccggcaccttctacccggaactggcctcgttgaatacc
gatcgtttcagcacccagcgtccggaagcggtgaataacctgctgaaagaagccgaagcg
cgcaacctgagcctgctttccgcccgtctgagccaggatctggcgcgcgagcagatcaaa
tcagcgcaaaccggctatatgccgaccgttgatttcagcgcttcaaccgccgtgtccaac
aacagatacagcggttcccgcagtatttctacggacaacgatgccggcgagaacaaagtg
gggctgagcttcaatctcccgctgtacagcggcggccagaccaattcgcaggtgcaacag
gcgcagtacaacttcgtcggtgccagtgagcaactggaaagcgcgcaccgcagcgtagtg
cagaccgtgcgttcgtcattcaacaacgtgaacgcttcgatcagcagcatcaatgcctac
aaacaggccgttatctctgcacagagttcattggatgcgatggaagccggttaccaggtg
ggtacccgtaccatcgttgacgtgctggatgccaccaccacgctgtataacgccaagcag
cagctctccagcgcgcgttatacctatctgatcaatcagttgaacatcaagtccgcactc
ggcacgctgaatgaaaatgacctgctgttactgaacggcgcgttgggcaaaccgatttct
acctcgcaggatgtggtagcgccgccaaccaccgcgcaagacgcttacgcggaaggttat
aacggcaatgcccctgcgccgcaaacggctgcaccggcgccggtcgctacccgcgcatct
gcgccggcgatcaccaccacccagccggcgcgcagcaacagcggtaatccattccgcaac
tga
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