Skermanella rosea: JL101_012060
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Entry
JL101_012060 CDS
T07666
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
sroe
Skermanella rosea
Pathway
sroe01501
beta-Lactam resistance
sroe01503
Cationic antimicrobial peptide (CAMP) resistance
sroe02020
Two-component system
sroe03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sroe00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JL101_012060
09132 Signal transduction
02020 Two-component system
JL101_012060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JL101_012060
01503 Cationic antimicrobial peptide (CAMP) resistance
JL101_012060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sroe02000
]
JL101_012060
02044 Secretion system [BR:
sroe02044
]
JL101_012060
01504 Antimicrobial resistance genes [BR:
sroe01504
]
JL101_012060
Transporters [BR:
sroe02000
]
Other transporters
Pores ion channels [TC:
1
]
JL101_012060
Secretion system [BR:
sroe02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JL101_012060
RTX toxin transporter
JL101_012060
Multiple protein transporter
JL101_012060
RaxAB-RaxC type I secretion system protein
JL101_012060
Antimicrobial resistance genes [BR:
sroe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JL101_012060
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JL101_012060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UEM06131
LinkDB
All DBs
Position
complement(2618162..2620210)
Genome browser
AA seq
682 aa
AA seq
DB search
MSLPTVSAAAALLALALSPGPAAAQQQPGTEPPAGIPAGLFTSDPARIVDERGGNAVVAA
TRTALARTGVLFAPEQTRELALREAALTALQRNLDVKRIGLNRSVVQRTLVEAEAVFDPV
FILAANASLSNSFERIERPMQWKPATQEYVRGQQIPTGTRTDDIFLCGTMDDILSQPPEL
QTNFLRGRMIAPDSNGRCHVRALPSTAPVALIAFDKERVAGYYPFRKEASTRSPNGRTET
YTGTAGVSQRLPWGGNLDLTVVTTYRDAYYVNNPDDPSTRVYGSYARPWTSRATLSGSHP
IPYTRNFREGDENRLSIDTARLNIDVADFAVRGVVNQTLLGVDTLYWTLVGAIQRLDAAA
GSVTLAEESAARMQRRMELGLASESNRGQVVAQMERLRAVQQQLFGDYLTASESLRELLD
EQDEALLLPIEYSAALDQPPEVPPASGDGVGRLAARVLDSPDYLRSETAVRIALRVRETR
DAQTRPDVTASGSLQVSQSNAVFGYSSVTDSLGSLISYDSASLSIGVLYRRPIGNRAAKA
ALAGADHDIARQTHLLHQVERQIRGDYETARIQLASARQRIDDTARRLALARDLYDRAAR
LEAGGVVTVYETIERLGTLLEARLGHIQARIDARIAESRMLASIGALAERYGEGVAQTRE
DRERIALLRGTGALAAFGEPPR
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcccacggtttccgccgcggcggcactcctggcattggcgttgtctccggga
cccgccgcggcacagcagcagccgggcacggagcctccggcggggatcccggcggggctc
ttcacaagcgatccggcgcgcatcgtcgacgaacggggcggcaacgccgtggttgccgcg
acccgcacggcccttgcccggaccggggtcctgttcgccccggagcaaacgcgggagctg
gccctgcgcgaagcggcgctgacggcattgcagcgcaatctcgacgtcaagcggatcggg
ctgaacagatccgtggtccagcgcaccctggtcgaggcggaagcggtcttcgacccggtc
ttcatcctggcggcgaacgcctccctgtcgaacagcttcgagcggatcgagcgtcccatg
caatggaagcccgccacgcaggaatatgtccgcggccagcagatcccgaccggcacccgg
acggacgatatcttcctgtgcggcaccatggacgacatcctgagccagccgccggaactc
cagaccaacttcctgcgcggccggatgatcgcgccagactcgaacgggcggtgccatgtc
cgggcactgccgtccaccgcgccggtggccctgatcgccttcgacaaggagcgggtcgcc
gggtactatccgttccgcaaggaggcgagcaccaggagcccgaacggccggaccgagacc
tataccgggaccgccggcgtttcccagcggctgccctggggcggcaacctggacctcacc
gtcgtcacgacctaccgcgacgcctattacgtcaacaatcccgacgatccctcgaccagg
gtctacggctcctacgcccgcccctggacctcgcgcgcgacgctgtccggcagccatccg
attccctacacgcggaacttccgcgagggggacgagaaccggctgtcgatcgacaccgcg
cgcctgaacatcgacgtcgccgatttcgcggtgcgcggcgtggtcaaccagaccctgctc
ggcgtcgataccctttattggacgctggtcggcgcaatccagcgactcgacgcggctgcg
ggttccgttaccttggcggaagagagcgccgcgcgcatgcagcgcaggatggaactgggt
ctcgccagcgagagcaaccgcggccaggtcgtcgcccagatggagcgcctgcgcgccgtc
cagcagcagctcttcggcgattatctcaccgcgtccgaatcgctgcgcgagctgctggac
gagcaggacgaagctctgctgctgccgatcgagtacagcgcagccctggaccagccgccc
gaggtgccgccggcatccggcgacggggtgggcaggctggcggcccgggtgctggacagc
cccgactacctgaggtcggagacggcggtccggatcgccctccgggtgcgcgagacgcgg
gacgcgcagacccgaccggacgtgaccgccagcggatcgctccaggtcagccagagcaac
gcggtcttcggctattcaagcgtgaccgattccctgggcagcctgatcagctacgacagc
gcgtccctcagcatcggcgtcctctaccgccggccgatcggcaaccgcgccgccaaggcg
gccctggccggggctgatcacgacatcgcccggcagacgcacctgctgcatcaggtcgag
cgccagatccgcggcgactacgagaccgctcgcatccagctcgccagcgcccgccagcgg
atcgacgacaccgcacggcgcctcgcgcttgcccgcgacctgtacgacagggcggcccgg
ctcgaagccggcggtgtcgtgaccgtctacgagacgatcgaacgcctcggcaccctgctg
gaggcgcgcctcggccacatccaagctcggatcgacgcccgtatcgcggaaagcaggatg
ctggccagcatcggcgccctggccgagcggtacggcgagggcgtcgcccagacccgcgag
gatcgggagcgcatcgccctgctccgcggcaccggcgcgctcgccgccttcggggagccg
ccgcgatga
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