Serratia plymuthica AS9: SerAS9_3936
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Entry
SerAS9_3936 CDS
T01503
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
srr
Serratia plymuthica AS9
Pathway
srr01501
beta-Lactam resistance
srr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
srr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SerAS9_3936
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SerAS9_3936
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srr02000
]
SerAS9_3936
01504 Antimicrobial resistance genes [BR:
srr01504
]
SerAS9_3936
Transporters [BR:
srr02000
]
Other transporters
Pores ion channels [TC:
1
]
SerAS9_3936
Antimicrobial resistance genes [BR:
srr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SerAS9_3936
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SerAS9_3936
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SerAS9_3936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CLZ
Motif
Other DBs
NCBI-ProteinID:
AEF47036
LinkDB
All DBs
Position
4199438..4200889
Genome browser
AA seq
483 aa
AA seq
DB search
MRSPFNWRFTPLFAVLLLAGCASTDNIAPQSTLMDSQSLQLSQPKVSSLNVSPQWWRALN
DPQLDALMTRTLQSSPTLRQAAARVREAQSVMGQANAANGPNLDLNASTNRQKVPQNVNM
GLGYPHKPIYESSNSLGLNLAYEFDWWGKYRNQVNAAKAQVDAARAEQEQAALTLTSSVA
SSYYQLQSNFAQEKLLQQEVDNNQSLTELRQRQYKAGITGIDIPQQTQAQADSAKQQILQ
LQSQIEQLKHQLAALAGQGPSAMQNLRPVALPANTLMAPKGELTADLLGKRPDIAAQRQL
VESYNQRVSAARKEFYPSLTISAFAGLTTTNTSGTSPNLFEAASQAWNVMPAISLPIFHA
GALRSKLGEESALYDEAVESYNQTILNAVQETADAITVQQSTAQQQLQAASASQSMQQVY
RVANARYQAGIIGRDELLTSQTQLLQQQQAELTASSNLLQAKIGLIRALGGGYQAPAIAD
SKA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccccatttaactggaggttcaccccgctgttcgcggtattactgctggccggg
tgtgcatctaccgataatattgccccgcaatccaccctgatggactcgcagagcctgcag
ctgtcgcaaccgaaggtcagctcgctgaacgtcagcccgcagtggtggcgtgcgcttaac
gatccacagctcgatgccctgatgacccgaacgctgcaaagctcgccgacgctgcgccag
gccgcggcccgcgtgcgcgaagcgcagagcgtcatgggccaagccaatgccgccaacggc
ccgaacctggatctgaacgccagcaccaaccgccagaaagtcccgcaaaacgtcaatatg
gggttggggtatccgcataagccaatctatgaaagctccaactcgctggggctgaatctg
gcctatgaatttgactggtggggcaagtaccgcaaccaggtcaacgccgccaaggctcag
gtcgatgcggcccgtgccgagcaggaacaggctgcgttgacgttgaccagttcggtggct
tcctcctattaccagttgcagagcaatttcgcgcaggaaaaactgctgcaacaggaagtg
gacaacaaccaaagcctgacggaactacgccagcggcagtataaagccggcatcaccggc
attgatattccgcaacaaacccaggcgcaggccgacagcgccaagcaacagatcctccag
ttgcaatcgcagattgaacaacttaaacatcagttggcggccctcgccggccaaggcccg
agcgccatgcaaaatttgcgtccggtggctttgcccgccaatacgctgatggcgccaaaa
ggcgaactgaccgcagatctgctggggaaacgcccggacatcgccgctcaacgtcaattg
gttgagtcctacaaccaacgcgtcagcgccgcacgtaaagaattttatcccagcctgacc
atttcggcctttgccggtctgaccaccaccaatacctccggcaccagcccgaatctgttt
gaagcggccagccaggcctggaacgtgatgccggcgatttcgctgccgatcttccacgcc
ggtgcgctgcgcagcaagttgggtgaggagtccgcgctgtatgacgaagcggtggaatcc
tataaccaaaccatcctgaatgccgtgcaggaaaccgccgatgccatcaccgtccagcaa
agtactgcgcaacagcagttgcaggcggcatccgcgtcccaatcgatgcagcaggtgtac
cgagtcgcaaacgcacgataccaggcagggattatcgggcgcgacgaactgttgaccagc
cagacgcagctcttgcagcagcaacaggcggaactgacagccagcagcaatttgttgcag
gcgaagataggactgatccgcgcgttgggcggtggctatcaagccccggccatagcggat
tcaaaagcataa
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