Serratia plymuthica S13: M621_21955
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Entry
M621_21955 CDS
T02716
Name
(GenBank) formate dehydrogenase
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
sry
Serratia plymuthica S13
Pathway
sry00680
Methane metabolism
sry00720
Other carbon fixation pathways
sry01100
Metabolic pathways
sry01120
Microbial metabolism in diverse environments
sry01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sry00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
M621_21955
00680 Methane metabolism
M621_21955
Enzymes [BR:
sry01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
M621_21955
1.17.98.5 hydrogen-dependent carbon dioxide reductase
M621_21955
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
PLD_C
Zn_ribbon_HMPTM
Motif
Other DBs
NCBI-ProteinID:
AGP46029
UniProt:
S4YMT6
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All DBs
Position
4660778..4662934
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AA seq
718 aa
AA seq
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MKKITTVCPYCGAGCKMKLVVDNGKILRAEAADGATNQGELCLKGYYGWDFLNDTKLLTP
RLTQPLIRREKGGKFEAVSWDEAIRYTAQRLKAIKQQHGARAIMHTGSSRGTGNETNYVM
QKFARAVIGNNNVDCCARVCHGPSVAGLQATLGNGAMSNSIGDIENSKCLLIIGYNCADS
HPIVARRVLKAKEKGAQIVVCDPRRIETARIADQHLQINNGCNMALVNAFGHVLIEENLY
DRDYVAKYTEGFDAYRQQVADYAPETVEQLTGVSAQQIRQAMRTYASAPSATIMWGMGVT
QFGQAVDVVKGLASLALLTGNLGRANVGVGPVRGQNNVQGACDMGVLPNEFPGYQSVTDP
AVRAKFAAAWGIDAAGMDPDIGYRITEVPHLVHEGKVKAYYIMGEDPLQTEADLSLVRSA
FDALEFIVVQDIFMTKTAEQADVILPSTSWGEHGGVFSCADRGFQRFEKAIEPQYNVKRD
WEIISLLATELGYPMHYEDNQQIWDEMRELCPLFYGATYEKMGELGHIQWPCTTLDSPGT
PYLYQGNQFTTPSGKGQLFATTWRAPAEVPDAAYPLVLCTVREVGHYSCRSMTGNCAALQ
TLADEPGFVQINPQDAAALGIGDQQLVWVASRRGKVISRANYNERINLGAVYMTYQWWIG
ACNELTQENLDPISKTPETKYCAVKLEAIGDQNWAENYASQSYSDMKARLRRAVEDVM
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaatcacgaccgtctgcccttactgtggcgcaggctgcaaaatgaaactggtg
gtggataacggtaaaatccttcgcgcagaagccgccgacggcgcaaccaatcagggcgaa
ctgtgcctgaaaggctactacggctgggacttcctcaacgataccaagctgctgacgccg
cgcctgacgcaaccgctgatccgccgtgaaaaaggcggcaagtttgaagcggtcagttgg
gacgaagccatccgctacaccgcacagcggctgaaagccatcaagcagcaacacggcgca
cgcgccattatgcacaccggctcctcacgcggtaccggcaacgaaaccaactatgtgatg
cagaagttcgcccgcgcggtgatcggcaacaataacgtcgactgctgcgcccgcgtctgt
cacggcccgtcggtagccggtttgcaagccacgctgggcaacggcgcgatgagcaactcg
atcggcgatatcgaaaactccaaatgtttactgatcatcggctacaactgcgccgactcg
cacccgatcgtcgcccgtcgggtcctgaaggccaaagagaaaggcgcgcaaatcgtggtc
tgcgatccgcgccgcattgaaaccgcgcgcatcgccgatcagcatctgcaaatcaacaac
ggctgcaatatggcgctggttaacgccttcggccacgtgctgatcgaagaaaacctgtat
gaccgcgattatgtggcgaaatacaccgaaggcttcgacgcctatcgccagcaagtggcc
gattacgcgccggaaacggtggaacagctgaccggcgtcagcgcccagcaaatccgtcag
gcgatgcgcacctacgccagcgccccttccgccaccatcatgtggggcatgggcgtcacc
cagttcggccaggcggtggatgtggtcaaagggttggccagcctggcgctgttgaccggt
aacctcgggcgcgccaacgtcggcgtgggcccggtgcgcggccagaacaacgtccagggc
gcctgcgacatgggcgtgctgccaaacgaattccccggctatcaatccgttaccgaccct
gccgtccgcgccaaattcgccgccgcctggggcattgacgccgccggtatggatccggat
atcggttatcgcatcaccgaagtgccgcacctggtgcacgaaggcaaagtgaaagcctat
tacatcatgggggaagatccgctacagaccgaagccgatctcagcctggtgcgtagcgcg
ttcgatgcgcttgagtttatcgtggtgcaagacatcttcatgaccaaaaccgccgaacaa
gcagacgtgatcctgccatccacctcctggggcgagcacggcggcgtgttctcgtgcgcc
gatcgcggtttccagcgtttcgaaaaagccatcgaaccgcagtacaacgtcaagcgcgac
tgggaaatcatcagcctgctggcgaccgaactgggctatccgatgcattacgaagacaac
cagcaaatctgggatgaaatgcgcgagctgtgcccgctgttttacggcgcgacctacgaa
aaaatgggcgagctcggccacattcaatggccttgcaccacgctcgacagcccaggcacg
ccgtatttgtatcagggcaatcaattcaccaccccgtccggcaaggggcagttgttcgcc
accacctggcgcgccccggcagaagtaccggacgccgcttatccgctggtgctgtgtacg
gtgcgtgaggtcggccactactcctgccgctcgatgaccggcaactgcgccgccttgcaa
acgctggcggatgagccgggcttcgtgcaaatcaacccgcaggacgccgccgctctgggc
attggcgatcagcaactggtgtgggtcgcctcgcggcgcggcaaggtgatctcccgcgcc
aactacaacgagcgcattaacctgggcgcggtgtacatgacctatcagtggtggattggc
gcctgcaatgaattgacgcaggaaaacctcgatccgatatccaaaacgccggaaaccaag
tactgcgcggtcaagctcgaagcgattggcgatcaaaactgggcggaaaactacgccagc
caaagctacagcgacatgaaagcccgcctgcgcagggcggtggaagacgtgatgtga
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