Swingsia samuiensis: E3D00_02060
Help
Entry
E3D00_02060 CDS
T06080
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
ssam
Swingsia samuiensis
Pathway
ssam01501
beta-Lactam resistance
ssam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E3D00_02060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3D00_02060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssam02000
]
E3D00_02060
01504 Antimicrobial resistance genes [BR:
ssam01504
]
E3D00_02060
Transporters [BR:
ssam02000
]
Other transporters
Pores ion channels [TC:
1
]
E3D00_02060
Antimicrobial resistance genes [BR:
ssam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E3D00_02060
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
E3D00_02060
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
E3D00_02060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QDH16491
UniProt:
A0A4Y6UJC8
LinkDB
All DBs
Position
complement(430684..432285)
Genome browser
AA seq
533 aa
AA seq
DB search
MSLVSKKRLDLPRNVLRSATALVGALSIGLTSCDLAPEYHPQKFLYPDGWEGKGIMGDAR
PADDVNREDWWTAFNDPVLNDLETRMLATNPDLQAAAEAFTQARDVARETESRLYPQITG
FGHMSANKGSDGRLYNNPRTSTSLVYESNEAYSGAATWEPDFWDAIRNSTRLHRNLAQVS
AAQYMSAKLSLEAELASDYVALRGLDAQNAVYEDSIHYFRTAVQITSLRQEGAIGAGLDV
SRAQNQLYAAMAAQSKLVAQRRVLENAIAILLNTAPAGFHIAPIQNVKMSLGVVKINPGL
PSTLLERRPDIAAAERRMSAASKAIGVSRAAFYPHITLSVGGGFEDGGFDLASISNAFWR
VAVQAVEPAFTGGLRRAALQRAWSQYRETVDQYRSVVLSAFQDVENGLTQTGQLKKAQDE
QAKAVAAAQRTQSMTMALYTGGLSNYLDALVAQQDTLAARLELVATQTAQVQASVRLMRA
LGGGWNVQKLPSTDQINTFGPFQYEGLRNPKPVAGIGRAPLPQDNDLRGDHKN
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagccttgtaagtaagaaacgtttagatttgccaagaaatgtgttgcggtctgcgacg
gctcttgtgggtgctctatcaatagggttgacctcttgtgatctggcgcctgaatatcat
ccgcaaaaattcctttacccggatggctgggaagggaagggcattatgggagatgcccgt
ccagcggacgatgttaatcgtgaagactggtggacggcatttaatgatccagtattaaat
gatctggaaacacgtatgcttgcgactaatccggacttgcaggctgccgcagaagcattc
actcaagcgagagatgtagcgagagaaacggaaagccgtctctacccacaaatcacgggc
tttgggcatatgagtgcgaataaaggctctgatggacggctctataataatccgcgcact
agtacttcgctggtttatgaatcgaatgaagcctatagtggtgctgcgacatgggagcct
gatttttgggatgctattcgaaattccacacggctccatagaaatttagctcaggtctct
gctgcgcaatacatgtctgcaaagttgagccttgaggccgaattagcgagtgattatgtc
gcattgcgtgggttggatgcgcaaaacgcagtttatgaagactcaatccattatttccgt
acggctgttcaaatcacgtcgttaaggcaagaaggcgcgattggagctggattggatgtt
tcccgtgcgcagaaccaattatatgcagcgatggctgctcagagcaaattggttgctcag
cgacgggttctggaaaatgcgattgcgatattattaaatactgcacctgcaggcttccat
attgctccgattcaaaatgtcaaaatgtcgctaggagttgttaaaatcaacccaggcctt
ccttcgacattgttggaacggcgcccagatattgctgcggctgaacggcggatgtcggca
gcatcaaaagccattggtgtctcacgggctgccttttatccgcacatcactcttagtgtt
gggggtggttttgaggatggcggctttgatttggcgagtatttcaaatgcgttttggcgc
gttgctgtgcaagctgttgagcctgcatttactggcgggttaagacgtgcggctttgcaa
cgagcatggtcgcagtaccgtgaaacagtagatcaataccgttctgttgtgctctctgcc
tttcaggatgttgagaatggtttgacccaaactggacagctgaaaaaagctcaggatgag
caggcgaaggctgttgcggctgcgcagcgaacgcaaagtatgacgatggcgctttatacc
ggagggctctcgaactatcttgatgcgctcgttgctcagcaagacactttggctgcgagg
ctggagcttgttgcaacgcaaactgcccaagtgcaggcatctgttcgtctgatgcgtgca
ttgggagggggttggaatgttcaaaaactaccttcaacagatcaaattaacacttttggt
ccgttccaatatgaaggtttaagaaatcctaagcctgtagctggcataggcagggcccca
ttgcctcaagataatgatttgcggggagatcataagaattaa
DBGET
integrated database retrieval system
