Swingsia samuiensis: E3D00_06075
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Entry
E3D00_06075 CDS
T06080
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
ssam
Swingsia samuiensis
Pathway
ssam01501
beta-Lactam resistance
ssam01503
Cationic antimicrobial peptide (CAMP) resistance
ssam02020
Two-component system
ssam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssam00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
E3D00_06075
09132 Signal transduction
02020 Two-component system
E3D00_06075
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E3D00_06075
01503 Cationic antimicrobial peptide (CAMP) resistance
E3D00_06075
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssam02000
]
E3D00_06075
02044 Secretion system [BR:
ssam02044
]
E3D00_06075
01504 Antimicrobial resistance genes [BR:
ssam01504
]
E3D00_06075
Transporters [BR:
ssam02000
]
Other transporters
Pores ion channels [TC:
1
]
E3D00_06075
Secretion system [BR:
ssam02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
E3D00_06075
RTX toxin transporter
E3D00_06075
Multiple protein transporter
E3D00_06075
RaxAB-RaxC type I secretion system protein
E3D00_06075
Antimicrobial resistance genes [BR:
ssam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
E3D00_06075
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
E3D00_06075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QDH17179
UniProt:
A0A4Y6UHV0
LinkDB
All DBs
Position
complement(1314019..1315572)
Genome browser
AA seq
517 aa
AA seq
DB search
MKNRQLACFSKLCSLFFLSSCASQELRTAPQRSDQAWQPTVNAQNVIIPQHSRQHTLLMP
QEYSLPANKDIQIRPASAVENAHNFTLPELIDLAQSNNPQTKIAWEEAKNAALSVGITKS
TYLPQLTATIVGGYTHRKNQGNSITSASAHGEIQTLGMQWLLFDFGRKEALIKAAREDQI
ASNIMFTQEHQKIIYNVTVSFYSYLSNKAHIALLQTALNNAKKIEKAAQAKLKYGQGTIT
DLLQSQQLIAQSEVRLVQAQGALNNAYITLINNIGISPKSHIAIEDIQKHDLDTHTIHLT
DNIIQEYLEQRPDVLAAYAKVKSAQSRVKAAQKEFLPKIFLSGNMAYSTGRLGLSSAPSV
GSNSSPTYNLSTNSFSGIILGGVTVPIFDGGLRSATLKQAKNMSDSSEASLQQTVDNSVK
QIIVSENSLSTSLSAYSASEKLEKTSLSSFDASLISYQNNIGSIVQLAMAQNSLIDAEMN
ESDAYYASLIAATDLAFASGSLTNDQPIDKNLPPKGL
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccgccaacttgcctgtttcagtaaactttgtagcttattttttctcagtagc
tgcgcatcgcaagagttaagaacagctccacaacgttcagaccaagcatggcaaccaacg
gtaaacgctcaaaatgtgattattccacaacattcacgtcagcatacacttttgatgcct
caggaatattccttaccggctaataaagatatccagatacggcctgcctctgctgtagaa
aatgcacataattttactcttcctgaactcattgacttagcgcagtccaataacccacaa
acaaaaatagcgtgggaagaagccaaaaacgcagcgttaagcgttggaattacaaagagt
acatatcttccacaactgacagcaacaatcgttggcggctacactcatcgcaaaaatcaa
ggcaattcaattacgagtgcatctgctcatggagaaatccaaactttaggtatgcagtgg
cttttatttgactttgggagaaaagaggccctcataaaagctgcacgagaagatcaaatt
gctagtaacattatgttcacacaagaacatcaaaaaattatctataatgttactgtgtct
ttttatagctatttatcaaataaagcacatattgctttacttcaaacagccctcaataat
gcaaaaaaaatagaaaaagccgctcaagcaaaactaaaatatggccaaggaacaataaca
gacctcctgcaatcacaacaacttattgcacaatctgaagttcgccttgtgcaagctcaa
ggagcgttaaacaatgcatatataaccctcattaataatatcggtatttcaccaaaatcc
catatcgctattgaggatattcaaaaacatgatcttgatactcacacaattcatttaact
gataatattatacaagaatatcttgaacaacgccccgatgttctggcggcctatgccaaa
gttaaatctgcgcagagccgtgttaaagcagctcaaaaagagtttcttcccaaaatcttt
ttatctggaaatatggcttattcaacaggtcgactaggcctttcctctgctcctagcgtt
gggagtaatagttctccaacctacaatctctcgaccaatagctttagcggaataatcctc
ggtggggttactgtgccaatatttgatggagggttaagatctgcgacattaaaacaagct
aaaaacatgtctgatagttcagaagcgagtttacaacaaacggtcgataactctgttaag
caaattattgtatctgaaaactctcttagtacgagtttaagtgcctattcagcttcagaa
aaactcgaaaaaaccagtttatcaagttttgatgcttctcttatatcttatcaaaataat
attggatccattgttcaactcgccatggctcaaaatagtttaattgatgctgaaatgaat
gaatcagatgcttattacgcctcattaattgcagcgaccgatttagcatttgcgagtggt
tcactcacgaacgatcagcctatagacaagaatcttcctcccaaagggctctga
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