Scomber scombrus (Atlantic mackerel): 133983904
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Entry
133983904 CDS
T10651
Name
(RefSeq) uncharacterized protein LOC133983904
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133983904
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133983904
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133983904
Enzymes [BR:
ssco01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
133983904
Peptidases and inhibitors [BR:
ssco01002
]
Serine peptidases
Family S1: chymotrypsin family
133983904
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Opsonins
133983904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trypsin
CUB
Sushi
FXa_inhibition
EGF_CA
CDCP1_CUB_6
cEGF
CUB_M02D8_5_3rd
EGF_3
Motif
Other DBs
NCBI-GeneID:
133983904
NCBI-ProteinID:
XP_062279103
LinkDB
All DBs
Position
7:complement(19816514..19832684)
Genome browser
AA seq
1427 aa
AA seq
DB search
MLKLSLLLLKFLLLPYSTYSLLLGWVESPGYPSGYLPHASLNWSRCAPKGHTLSIRLIHL
DLEDSQDCENDAVKIFSNGNLISILCGKREFEELQTTVNPVLQSSPGGCLILSFHSDFSN
TKRHTGFRGFYTVQDFDECEDDPDNGCTQFCHNFIGGYRCSCRHSYHLGADKHTCTVSCN
QDLSGLTRGEISSPSWPGSYAENANCKYTLSVDDHLQLELHFSDLFDVEESPDGQCIDGL
RIHTSSGTLGPYCGNTPPRSPLLTHSNQVQITFTSDSFGTNKGFNLHFKTTDKVCPSVVT
PHSTVTPEEPEYHQGQTVTVTCDDGHELNIKSKSSQYLTTCQSTGVWAPSYICERVDCGF
PDIPEDGILKVMGSDNQHTQYTDQIQFHCSSNYYKLEGDDTYICNASGQWQSSSGKTEMP
KCTEVCGMPENEPQSTARILGGKIAKLGEIPWHLLIKEPSRGGATLINDRWAVTAAHVVE
HVEQTSLRLYGGLIDGRTSSTDPNVVVITSEKIIIHPGYARNVNDRTNFDNDIALIRFDA
RVNLGPNLLTICLPEGTIDLVEGEQSTVSGWGVTDRGRSSAVLRYTTIGVYSLEDCQKTP
ELSPNNPMVFTDNMFCAGADGKDSCEKDSGGPFVVPMLTGGNGPYRLAGIVSWGPPCRER
KYKGYYTKVKNYVPWIRDTIDATEKSLKGTVETTDFVTLMFHLNVRRLLLQQRKNSIMNM
FNPKMGWTSCLICFLYVSVCECWPLPDSEPVMYGEVQSPQYPQPYPSNLLKQWDLSVPEG
YQIRLTFTHLDIEASAGCYYDALTVLYDEKVLGKFCGQENSADGRHPGNQPIFSLSNRLT
LILQTDDNNPERHQNVGFSAHYQAKDIDECSRPEPGDGPLCSQICLNTLGSYLCSCHHGY
ELRSDQRTCVLSCHGGIFDEPEGHLSSPGYPHAPPHAVSCQYIISVEPGFTVSLNFSDKF
QIESVDTHQGQTCLHHWLEVTIPENEPVKLCGGQSPGLITTNSNTVRLEYHTDDDGQSNG
WNLDYSTHRVKCPFPGNLPKGRVTPVLTEYFYRDYIYVRCDQGYKLMMDDQEIDSFSAMC
QNNGQWHLPLPECRIIDCGEPEALLNGGLTFLSGFQNQYRSVVQYHCNEPFYSLLGDVNV
SFTCEADRRWRSNHDVIVTPTCIPVCGKPTTLISAYQRIIGGKEAPDNTIPWQVLLNIDG
GRGGGMIIADRWVMTAAHNLIHNGQKVPIQTVRIFMGGTDVEDIRDSRVNADSIHVHPGY
NNPNNVDYNNDVALIKMEQQITFNSSVMPVCLPAEGATYVTGLMGLVSGFGVTDRNGTRI
LTNKLKYVQLPVVSQETCRDSINLLKRTKKTPLPTLSDNMFCAGVPEGGKDSCQGDSGGP
YALDENGQFWAAGIVSWGIDCGKPGIYGVYTRVMNYVDWIKKTMEEN
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaattaagtctcctgcttctcaagtttctcctgctgccctactcgacctactca
ctgcttctgggttgggtggagtctccaggttatcccagtggatacttgccccatgccagt
ctcaactggagcaggtgtgcccccaaaggtcacaccctctccatcaggctcatccacctg
gacctggaggacagtcaagactgtgaaaacgatgccgtgaagatcttttcaaatggaaac
ctgatttccatcctgtgtgggaaaagagaatttgaggagcttcagaccacagtaaatcct
gtgctccagtcctccccgggcggctgcctcattctctcctttcactctgacttctctaac
accaagaggcacaccggcttcagaggcttttatactgtgcaagactttgacgaatgtgag
gacgacccagacaacggatgcacccaattctgtcacaacttcatcggagggtaccgctgc
tcctgtcgccatagttaccacctgggcgcagacaagcacacttgcacggtgagctgtaat
caggatctgtcagggctgaccagaggtgaaatctccagtccttcctggcctggttcatat
gcagagaatgcaaactgcaagtacaccctgtctgtggacgaccaccttcagctggagcta
cacttttctgaccttttcgacgtggaggaaagcccagatggccagtgcatagatggactg
aggattcacacttcctctggaactctggggccatactgtggcaacactcctccccggtct
cccctcctcactcactcaaatcaagtccaaattactttcacctctgatagcttcggcacc
aacaaaggcttcaacctccacttcaagaccacagacaaggtctgtccatctgtggtaact
ccacactccacggtgacccctgaggaaccagaatatcatcagggtcaaacagtaacagta
acttgtgatgatggccatgaattgaacataaaatcaaagtcatcacagtatctgacaaca
tgccagagtacaggcgtatgggctcccagttacatctgtgaacgtgtggattgtggtttt
cctgatatcccagaagatggcatccttaaggtgatgggctcagataaccagcacactcag
tatactgaccaaatccagtttcactgcagctcaaactactacaaactggagggagatgat
acatacatttgcaatgccagtggtcaatggcaatcaagcagtggcaagacagagatgcca
aaatgcactgaagtgtgtgggatgcctgaaaatgaacctcaaagtacagctagaattttg
gggggtaagattgcaaaactgggagaaataccttggcatcttctcataaaagaacccagc
agaggaggagcaacactgatcaatgaccgctgggcggtgacagcagctcatgtagttgaa
catgtagagcaaacctctttgcgcctgtatggtggactgatagatggaagaacatcgtca
actgacccaaatgtagttgtcattaccagtgagaagatcataattcatcccggctacgca
agaaatgttaatgaccgtactaattttgacaatgatattgctctcatcagatttgatgcc
agggtgaatcttggcccaaacctccttaccatttgtctgccagagggcaccattgacttg
gtggagggtgagcaaagcacagtgtcaggctggggagtgacagatcgtggtcggtcatct
gccgtgttaagatacacaactattggggtctactcccttgaagattgtcagaaaacacct
gagctgtcacctaacaaccccatggttttcactgacaacatgttctgtgctggagcagat
gggaaggacagctgcgagaaagacagtggaggtccgtttgttgtgcccatgttaactgga
ggcaatgggccttaccgtctagctggcattgtgtcttggggacccccatgtcgggagagg
aagtacaaaggttattataccaaagtgaagaattatgtaccctggattagagacacaata
gatgcaacagaaaaatcactgaaaggcactgtggaaacaacagactttgtaacattaatg
ttccacttgaatgtgagacgattgctgctacagcagcggaagaattcaatcatgaacatg
tttaatcccaagatggggtggacctcctgtctcatctgttttctgtatgtgtcagtgtgt
gaatgctggccgctgcccgactctgagcctgtaatgtatggggaggtccagtctccccag
tatccccagccttacccttccaacctcctgaagcagtgggacctcagtgtacctgagggc
taccagatccgactcaccttcacacacctggacatcgaagcttctgctggctgctattac
gatgcccttacagttctgtacgatgaaaaggtcctggggaagttttgtggccaagagaat
tctgcagatgggcgtcacccaggcaaccagcccatcttctctctaagcaacagactcact
ctcatattacaaacagatgacaacaacccagaacgtcaccagaatgttggtttctctgca
cattatcaagcaaaagacatagatgagtgttctaggccagaaccaggagatggcccactc
tgctctcagatctgcctcaacacccttggctcatacctctgctcctgtcaccatggctac
gaacttcgctcagatcagcgcacttgtgtgttgtcctgccatggtggtatatttgatgag
ccagagggacatctgtccagtccaggatacccacatgccccacctcatgctgtgtcctgt
cagtatattatctctgttgaaccaggcttcactgtctctctcaacttctctgacaaattc
cagattgagagcgtggacactcatcaaggccaaacctgtctccatcactggttggaggtg
accatcccagaaaatgagcctgtgaagctgtgtggtggacaaagcccaggtctgataacc
acaaactccaacactgtcagactggagtaccacactgatgatgatggccagagcaacggc
tggaacctggactacagcacacacagagtaaaatgtccatttcctggcaatttacctaaa
ggcagggtcactcctgtcttaactgagtatttctacagagactacatttatgtacgctgt
gaccaaggatacaagctgatgatggatgatcaggagattgacagtttctctgccatgtgc
caaaacaacggacagtggcacctccctctgccagaatgccgcataattgactgtggagaa
cctgaagcattgctgaatggagggttgaccttcctgtctggctttcagaatcagtatcgc
tctgttgttcagtaccactgcaatgagccattttactctctccttggagatgtaaatgtt
agcttcacctgtgaagcagatagaaggtggagatccaaccatgatgttattgtcactcca
acatgcataccagtttgtggcaagccaacaacacttatctctgcctatcagaggatcatt
ggaggcaaagaagctccagataataccattccatggcaagtactactgaatatagatgga
ggaagaggaggaggcatgataattgcagaccgctgggttatgactgcagctcataacctt
atacataatggacagaaagtaccaatacaaactgtgcggattttcatgggaggtactgat
gtggaagacatcagggactctcgtgttaatgctgactcaatccatgttcaccctggttac
aacaaccccaacaatgtagactacaacaatgatgttgccttgatcaaaatggaacaacag
atcacattcaactcatctgtaatgccagtatgtttgccagcagagggggccacatatgtc
actggcttgatgggacttgtctcaggctttggcgtcacagacagaaatggcacacggatt
ttaacaaataagctgaagtacgtgcaacttccagtggtcagccaggagacatgcagagat
tcaatcaatcttctgaagaggacaaagaaaacccctctgccaactctgtcagataacatg
ttttgtgctggagtcccagaaggtggaaaagactcctgccaaggtgacagtggaggaccg
tatgctctggatgaaaatggacaattctgggctgcaggtattgtcagttgggggatcgac
tgtggaaagccaggcatatatggagtctataccagagtcatgaactacgtagactggatc
aaaaagaccatggaagagaactga
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integrated database retrieval system
