Sphingobacterium siyangense: JVX97_09015
Help
Entry
JVX97_09015 CDS
T08059
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy01501
beta-Lactam resistance
ssiy01503
Cationic antimicrobial peptide (CAMP) resistance
ssiy02020
Two-component system
ssiy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JVX97_09015
09132 Signal transduction
02020 Two-component system
JVX97_09015
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JVX97_09015
01503 Cationic antimicrobial peptide (CAMP) resistance
JVX97_09015
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_09015
02044 Secretion system [BR:
ssiy02044
]
JVX97_09015
01504 Antimicrobial resistance genes [BR:
ssiy01504
]
JVX97_09015
Transporters [BR:
ssiy02000
]
Other transporters
Pores ion channels [TC:
1
]
JVX97_09015
Secretion system [BR:
ssiy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JVX97_09015
RTX toxin transporter
JVX97_09015
Multiple protein transporter
JVX97_09015
RaxAB-RaxC type I secretion system protein
JVX97_09015
Antimicrobial resistance genes [BR:
ssiy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JVX97_09015
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JVX97_09015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QRY59552
LinkDB
All DBs
Position
2177799..2179187
Genome browser
AA seq
462 aa
AA seq
DB search
MFKKIVLIGVFLLSCGVFCHGQENNIPIKLNDLLSAVAQHAPSLRTDYTGTMVQEARVQE
IRNNRLPSLQLSYQADLGSNNNVPGPYFGFGIVPTNNGGIRENNNYNAVSSNLAIAAFQW
EFYNFGAYQAQDQLAQSAVNVEKKRFDQSKYDLQSFTIYSYLQLLKLHDLIEIQTRSIDR
NREIRQSIFAVVKSGIRAGVDTSMADAEISRAKLSLIELENQQRQLQIRLSTLSALPPDQ
IVADTTAEKILFEQVKSSPIELNGGTQHPLVAYYNALFDKTKMEEKLVSKSYRPKLFLSG
AVWGRAASVDHSNSYRSLGEGFGVERGNYLVGVGINYNIFDLQRKKAKLHTQRLMVDQAG
QKLQEEQANITMNIAQSAAEVATAEQRLDEIPHQTKAANAAYRQKFSLYKNGLTDIVEVN
VAQNMLYQAERDYIAAKYNYYLALFHQVVAQNNVDGFLQLFK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtttaagaaaatagtcctgataggagttttcttgctttcctgtggcgttttttgtcat
gggcaggaaaataatatacctatcaaactcaatgatttgttgtctgcggtagcacaacat
gcgccttctttgcgtactgactatacgggtactatggtacaagaagctcgtgtgcaggaa
atacgaaataaccgtttgccgagtttgcagctatcctatcaagctgatctcggttcaaat
aataatgtgcccggcccttactttggatttggtattgtgccgaccaataatggggggata
cgtgaaaataataattacaatgccgtcagcagcaatcttgctattgcggcgtttcaatgg
gagttctataatttcggcgcgtaccaggcgcaagatcaattggctcaatcggcggttaac
gttgaaaagaaacgatttgatcaatcaaaatacgacctgcaatcgtttacgatctacagt
tatcttcagctgttaaaattgcatgatcttattgaaattcagacacggagtatcgatcga
aaccgagagatcaggcaatcgatatttgctgtagttaaaagcggtatccgggcgggagtt
gataccagtatggcggatgcggagatttcaagagcgaagctgagcttaattgaacttgaa
aatcaacaacggcagttgcagattcgtttatcgacgctttctgcattgcctcccgatcaa
attgttgccgatacgaccgctgaaaagatcctctttgagcaggtgaaaagttcgcccatt
gaattgaatggggggacgcagcatcccttagtagcctattacaatgctttatttgataaa
accaaaatggaggaaaagcttgtatcaaaaagctaccgtcctaagctctttctttcgggg
gcagtgtggggacgtgccgcgagtgtagatcacagcaatagttatcgttccctaggcgag
ggatttggagtggaacgaggtaattatctcgttggtgtcggaatcaattacaacatcttt
gaccttcaacggaaaaaagcaaaactccatacacagcggttgatggttgatcaggctggg
caaaagctgcaggaggagcaggccaatattacgatgaatattgcgcagtctgctgcggag
gttgctactgccgagcagaggttggacgagatcccgcatcagaccaaagctgctaatgca
gcctatcggcaaaagttctcgctttataaaaatgggcttacagatattgttgaagtcaat
gtcgcacaaaatatgctctatcaggctgagcgggattatatcgctgccaagtataattat
tacctcgcattgttccatcaggtcgttgcccagaataatgtagacggatttctccaactt
tttaaataa
DBGET
integrated database retrieval system
