Sphingobacterium siyangense: JVX97_19440
Help
Entry
JVX97_19440 CDS
T08059
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy01501
beta-Lactam resistance
ssiy01503
Cationic antimicrobial peptide (CAMP) resistance
ssiy02020
Two-component system
ssiy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JVX97_19440
09132 Signal transduction
02020 Two-component system
JVX97_19440
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JVX97_19440
01503 Cationic antimicrobial peptide (CAMP) resistance
JVX97_19440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_19440
02044 Secretion system [BR:
ssiy02044
]
JVX97_19440
01504 Antimicrobial resistance genes [BR:
ssiy01504
]
JVX97_19440
Transporters [BR:
ssiy02000
]
Other transporters
Pores ion channels [TC:
1
]
JVX97_19440
Secretion system [BR:
ssiy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JVX97_19440
RTX toxin transporter
JVX97_19440
Multiple protein transporter
JVX97_19440
RaxAB-RaxC type I secretion system protein
JVX97_19440
Antimicrobial resistance genes [BR:
ssiy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JVX97_19440
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JVX97_19440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QRY56181
LinkDB
All DBs
Position
complement(4542274..4543653)
Genome browser
AA seq
459 aa
AA seq
DB search
MKRFYYSTVVFTGLFLGTNDLVQAQQVVGVAEAIRTTLERNVQIKQAALNKDLAEQDLFQ
AKSNLLPNLSASVDQSFRYGFGFDLTSGRIVNNTWTKGTSGSVGSSVNLFQGFQQINQIK
ANKLQLESTATQVDKIKNDLVLNVLVNYLEAITNHEMMVASEDQIALSKQQFSLDSIQFA
VGNKTIADLAKSKNQVATNELNKVNLKNSYEMSLLTLKQLMEMPPETSISLERPSLESIL
VHAVDKNAVDVYQKALTLQPDIHKSALDKEVALKQIDIAKGGYYPTLNLNVSYGTNYSSA
TTRQTDPLDPATLFRVPFGQQISDNKSFFTGLSLAIPIFSRNQNKVNVAKAKIGLKQAEA
SEQLAKNNLSKAVNQAVLDVNAAKQRYSSATVAFESAETAFKATKERYDIGMANSLELFT
AQTERNKAEFDLIQAKYNVIFRSKIIDYYLGNPIQFDNN
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagattttattattctacagtagtatttactggattatttctaggaactaatgat
ttggttcaagcccaacaggttgtaggagtggcagaagccattcgtacgacattggaacgg
aacgtacagataaaacaagcggcgctgaacaaagatcttgccgagcaggacttgtttcag
gcaaaaagtaatttattgccaaacctgagtgctagcgtggatcaaagttttcgttatggc
tttggtttcgatttaacctccggacgaatcgttaataacacctggacaaaaggaaccagt
ggctcggtgggatcaagtgtcaatttatttcagggctttcaacagatcaatcagatcaaa
gcgaataaattgcaactggagtctacggcgactcaggtggataagatcaagaatgacctt
gtgctcaatgtgttggtcaattatttggaagcgattaccaatcacgagatgatggttgcg
agtgaagaccagatcgctttgtcgaaacaacaattttcattggactctattcagtttgcg
gttggcaataaaacaattgccgatcttgccaaatcaaaaaatcaggttgctacaaatgaa
ttgaacaaagttaatttgaaaaattcatacgaaatgtctttgttgaccttgaagcagctg
atggaaatgcctcctgaaacgtctatttccttggaacgtccaagcttggaatctatattg
gttcatgcagtggataaaaatgcggtggatgtctaccagaaagcgctcacattgcagccg
gatattcataagtctgcattggataaagaggtggcattgaaacaaatcgatattgcgaag
gggggctattatccgacactcaatttgaacgtaagttatggaacgaattactcgtctgca
acaacaaggcaaacagatccattggatcctgcgaccctttttagagtgccttttggccaa
cagatatcggataataagtctttttttaccggtttatctcttgctattccaattttttca
agaaatcagaataaagtaaatgtggccaaggcaaagatcggtttgaaacaggctgaagcc
tccgagcaattggcaaaaaataacttaagcaaggccgttaatcaggctgtgctggatgtg
aatgcggccaagcaacgctatagttcggctactgtagcatttgaaagtgctgaaacagca
tttaaggcgacaaaagaacgttacgatattggtatggcgaattcattggagttgtttact
gctcaaacggaacgaaataaggccgaatttgaccttattcaagcaaaatataatgtaata
ttcagatcaaagatcatcgattattacctcggaaatccaattcaattcgataacaattaa
DBGET
integrated database retrieval system
