Sphingobacterium siyangense: JVX97_19495
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Entry
JVX97_19495 CDS
T08059
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
ssiy
Sphingobacterium siyangense
Pathway
ssiy01501
beta-Lactam resistance
ssiy01503
Cationic antimicrobial peptide (CAMP) resistance
ssiy02020
Two-component system
ssiy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssiy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JVX97_19495
09132 Signal transduction
02020 Two-component system
JVX97_19495
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JVX97_19495
01503 Cationic antimicrobial peptide (CAMP) resistance
JVX97_19495
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssiy02000
]
JVX97_19495
02044 Secretion system [BR:
ssiy02044
]
JVX97_19495
01504 Antimicrobial resistance genes [BR:
ssiy01504
]
JVX97_19495
Transporters [BR:
ssiy02000
]
Other transporters
Pores ion channels [TC:
1
]
JVX97_19495
Secretion system [BR:
ssiy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
JVX97_19495
RTX toxin transporter
JVX97_19495
Multiple protein transporter
JVX97_19495
RaxAB-RaxC type I secretion system protein
JVX97_19495
Antimicrobial resistance genes [BR:
ssiy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
JVX97_19495
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
JVX97_19495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PAGK
Motif
Other DBs
NCBI-ProteinID:
QRY56191
LinkDB
All DBs
Position
4556057..4557397
Genome browser
AA seq
446 aa
AA seq
DB search
MNTKSRVRKIGFYLTLCFFTFFCNQTYGQDSINSQKITIEKLFELAIHNHPNLIVSASAV
SIAQQKTEVAKLRRLPEISASASAFYLGDAALIDKDLSGSEKVPLPHFGNNYALEAKELI
WKGGVVKNSIKVSTLGEELAELDHKNEEQNIKILVLGYYLDLFKLKNQEAVYNQNIELAH
KRLDLTEKLYKQGMITKNDVIRNQLQISELELAKEVIQNNRKILNDELIVALGLQEGTVI
EPDDKLLDSRFQLADLASLKQDAYVSSPGLQLAAKETELLQTEKAITKSERSPALSVFAG
NSLVKPITNVMPVIDKYMNTWNTGISLSYTISSVYTTGKKLKLNDLQIEKNEKYASALKQ
KTSVAVNTAYIKYNEAYSQRKTLEYNKALADENYRIIEKKYLNQLALIVDIMDASNSKLE
AELKYTNAEINIVYAYYKLLKETGKI
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaatacgaagtcaagagtccgaaaaataggtttttacttgacattatgcttctttaca
ttcttttgcaatcaaacatacggtcaagacagcataaacagccagaaaataacaattgaa
aaactgttcgaacttgctatccataaccacccaaatcttatcgtttcggcatcagctgta
agtatcgcccaacaaaaaactgaagttgcaaaattaagaaggcttcccgaaatcagcgct
tcggcatctgccttttacctcggcgatgctgcgttgatcgacaaagacttatcaggatcg
gaaaaggtgcctctaccccatttcggcaataattatgctttggaggcgaaagaacttatc
tggaaaggaggtgtggtaaaaaatagtatcaaagtctctaccttgggtgaggagctggct
gaattagatcataagaatgaagaacagaacattaaaattttggttttagggtattacctt
gatctattcaaacttaaaaatcaagaagctgtctataatcaaaatattgagctcgcccac
aaaaggctagacctgacggaaaaattatataaacagggcatgatcaccaaaaatgatgtc
atccgaaaccaattgcaaatatctgaattggaactagcgaaagaggtcattcaaaacaat
cggaaaatcctgaatgacgagcttatcgtcgcgttaggactacaggagggcacagtaatt
gagccggatgataaactattagatagcaggtttcagctggcagacctcgcgagcttgaaa
caagatgcttatgtgtccagcccgggccttcaacttgcggccaaagagaccgagcttctg
cagacagaaaaggcgattacaaaatcagaacgatcccctgcccttagcgtattcgcggga
aacagtcttgtgaaacccatcaccaatgtgatgccggtgatcgacaaatacatgaatacc
tggaatacgggtatctccctgagctatacgatttcatcagtctacacaactggaaaaaag
cttaagctaaatgatctacaaattgaaaaaaacgagaaatacgcaagcgctctgaaacaa
aaaaccagcgtagctgttaatactgcatacattaaatacaatgaggcctactcacaacgc
aagactttggagtacaataaagcgcttgcagatgagaactatcgtattattgagaaaaag
tatttgaaccaattggcgttgatcgtcgatatcatggatgcatcaaactcaaaacttgaa
gcggaattgaaatacacaaatgctgaaatcaatatcgtgtacgcatattacaaactttta
aaagagactggaaagatctag
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