Sediminispirochaeta smaragdinae: Spirs_3813
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Entry
Spirs_3813 CDS
T01287
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm01501
beta-Lactam resistance
ssm01503
Cationic antimicrobial peptide (CAMP) resistance
ssm02020
Two-component system
ssm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Spirs_3813
09132 Signal transduction
02020 Two-component system
Spirs_3813
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Spirs_3813
01503 Cationic antimicrobial peptide (CAMP) resistance
Spirs_3813
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_3813
02044 Secretion system [BR:
ssm02044
]
Spirs_3813
01504 Antimicrobial resistance genes [BR:
ssm01504
]
Spirs_3813
Transporters [BR:
ssm02000
]
Other transporters
Pores ion channels [TC:
1
]
Spirs_3813
Secretion system [BR:
ssm02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Spirs_3813
RTX toxin transporter
Spirs_3813
Multiple protein transporter
Spirs_3813
RaxAB-RaxC type I secretion system protein
Spirs_3813
Antimicrobial resistance genes [BR:
ssm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Spirs_3813
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Spirs_3813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
AMG1_III
Motif
Other DBs
NCBI-ProteinID:
ADK82899
UniProt:
E1R844
LinkDB
All DBs
Position
4112388..4113749
Genome browser
AA seq
453 aa
AA seq
DB search
MFYRLRSKLSITVLIFMSCSMAVAHAGEYDLAAYLERVERENLNLRLSRNDLDTANETTA
QARSALLPSIAAQGGYTRNLSDIDQSTAVAADVPSGTDATGGTAPLMYDDLDSNYDNEYL
MALSVTQKIFAPDAIASLMQAKKGEEISRTTYEATRRNILNSAKKLYAQTQLANQVLEVM
EAAEETAKENYQNAKRRFEAGLSAELDLLMAESTWKSSIPETAEARRNAQIALISFKTLA
GIPNDEEVVLTENNDEIPPLPEQYDLSDVLAQRPDYEATLLSKEIADIAKKAAMASFLPS
VDASLTYAKGLYRGYTSSSDRYDYDSFQLGLTVTVPLSTGGYRVSLTKSANLAQNKAHIA
IAQKHNDIEQELLSLRLTLEEAYQRIESARASESVAQKALRVAQSSYANGLGTQYAVNDA
LDQYQQARLGVYHALFEYRAAYYDWELATGKSY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcgacttcgatctaaattaagcataacagtgttgatattcatgtcatgttcc
atggccgtggcccatgccggggagtatgaccttgcagcctatcttgagagggtggaaagg
gaaaatctcaatttgagactttcccgcaatgatctcgatacggcgaatgagaccacggcc
caggcgcgttcggctttgctaccctccattgcggcacaaggcggttatactcgtaatctc
agtgacatagatcaatccacggccgtggctgccgatgtcccctccggcaccgatgctacc
ggagggaccgctcccctgatgtatgacgacctggattccaattacgacaacgaatatctt
atggcactgtcggtcacacagaaaatttttgcccccgatgccattgcttcgcttatgcag
gcgaaaaagggtgaagaaatcagccgcacgacttatgaggcaactcgacgcaacattctg
aattcggcaaaaaaattgtatgcacagacgcaattggcaaaccaggttctggaggtcatg
gaagcggcggaagaaacggcaaaagagaattaccagaatgccaagcgtcgttttgaggcc
ggactttcggcggagctcgatctgcttatggccgaaagtacctggaagtccagtattccg
gaaactgccgaggcccgccgtaatgcacaaattgcgcttatctcttttaagacactggcg
gggattcccaatgatgaggaggtcgtgctgacggaaaataatgacgaaatcccgcctctt
cccgaacaatacgatttaagcgatgtacttgcacagcgacccgattatgaggcgactttg
ttatcgaaggaaatcgcggacatagcgaaaaaggcggcaatggcctccttccttccatcc
gttgatgccagcctcacctatgcgaaaggcttataccggggctatacctccagcagtgat
aggtatgattacgattcatttcaacttgggttgaccgttaccgttcccctgtccaccggt
gggtatcgcgtatcgctaacaaaatcggcaaatcttgcacagaataaggcacatatcgcc
atagcccagaaacacaacgatatagagcaggaactgctcagtttgcggctgacgctggaa
gaggcttaccagcgtattgaatcggccagggcctcagaaagtgttgcccagaaggccttg
agggtagcacagagctcctacgcaaatggactaggcacacaatatgccgtcaacgacgcc
ctcgatcaataccagcaggctcgtcttggggtatatcatgccctttttgaatatcgggcg
gcatattatgactgggagctggccaccggcaaaagttattga
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